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Preprints

There are 2830 Preprints listed.

Acorn availability reduces agricultural damage by ungulates

Maria Bogdańska, Valentin Journe, Michał Bogdziewicz

Published: 2025-12-10
Subjects: Ecology and Evolutionary Biology, Life Sciences

Human-wildlife conflicts, particularly the damage to agricultural crops caused by ungulates, pose significant ecological and economic challenges. Understanding the role of natural food availability in driving these conflicts is important for developing effective management strategies. We investigated how the pulsed availability of forest tree seeds, i.e., mast seeding, influences the extent of [...]

The Plant Communities of Oman’s Central Coastline: A Baseline Ecological Assessment amid Rising Threats

Joshua Robert Taylor, Rebecca A Senior, Laila Said Al Harthy, et al.

Published: 2025-12-10
Subjects: Biodiversity, Botany, Desert Ecology, Life Sciences, Plant Sciences

In recent decades, the botanical knowledge within the Sultanate of Oman has advanced considerably. However, the coastal vegetation is comparatively understudied with much of the country’s extensive coastline still undocumented. This is despite Oman’s coast being faced with a plethora of threats including development, overgrazing and the invasive species Neltuma juliflora. This study presents the [...]

Life-history-specific thresholds for the Fishing Mortality Index: validation on 209 stocks

Kafkas M. Caprazli

Published: 2025-12-09
Subjects: Aquaculture and Fisheries Life Sciences, Ecology and Evolutionary Biology, Marine Biology

The exploitation fraction E = F/(F+M) has served as a standard metric for assessing fishing pressure since Gulland (1971), with E = 0.5 widely adopted as a precautionary threshold. However, E compresses the relationship between fishing mortality (F) and natural mortality (M) into a single dimension, obscuring magnitude differences across life histories. We introduce the Fishing Mortality Index [...]

Microbial contributions to host life history tradeoffs

Lauren Petrullo, Greg Albery, Aura Raulo, et al.

Published: 2025-12-09
Subjects: Life Sciences

All organisms must allocate finite resources among growth, maintenance, and reproduction, generating trade-offs that constrain adaptation. Here, we argue that host microbiomes are dynamic resource engines capable of reallocating and generating energy and resources for their hosts. In doing so, they may recalibrate the tradeoffs fundamental to life history evolution. 

Quantifying Three Decades of Artisanal and Small-scale Gold Mining Frontiers in the Guiana Shield (1995–2024)

Elmontaserbellah Ammar, Sean J Glynn, Kerry Anne Kansinally, et al.

Published: 2025-12-09
Subjects: Artificial Intelligence and Robotics, Biodiversity, Earth Sciences, Ecology and Evolutionary Biology, Environmental Monitoring, Environmental Sciences, Geography, Life Sciences, Natural Resources and Conservation, Remote Sensing, Sustainability, Terrestrial and Aquatic Ecology

Artisanal and Small-scale Gold Mining (ASGM) is a leading driver of tropical deforestation and forest degradation, yet its spatial and temporal dynamics remain largely underexplored. Here, we present a pan-regional, annual time-series analysis of ASGM expansion across rainforests of the Guiana Shield (Guyana, Suriname, and French Guiana) from 1995 to 2024. Using Landsat imagery, we trained a deep [...]

A chronosequence of human remains on soil microbial populations

Jason Reynolds, Natasha Robinson, Rani Carroll, et al.

Published: 2025-12-09
Subjects: Life Sciences, Physical Sciences and Mathematics

Surficial human decomposition produces substantial and measurable shifts in soil chemistry and microbial composition. This decade-long investigation examined temporal changes beneath surface deposited human remains and identified strong microbial and chemical responses in the first twelve to twenty four months, including decreased microbial diversity, elevated soil nutrients and sustained [...]

From patterns to predictions: A framework for the spatial epidemiology of wildlife diseases

César Herraiz, Pelayo Acevedo

Published: 2025-12-09
Subjects: Animal Diseases, Biodiversity, Epidemiology, Natural Resources and Conservation, Population Biology, Statistics and Probability, Veterinary Infectious Diseases, Veterinary Medicine, Veterinary Preventive Medicine, Epidemiology, and Public Health, Zoology

Wildlife diseases pose a significant threat to public health, livestock, and biodiversity conservation. In this context, spatial epidemiology offers a robust framework for elucidating disease dynamics and informing policy-making and disease management. The workflow in spatial epidemiology involves three main steps: (1) descriptive analysis of spatial dynamics; (2) exploration of the observed [...]

Habitat connectivity shapes biodiversity outcomes in Indonesia’s community-managed forests

Liam Jake Hughes, Nicolas J Deere, Radinal Radinal, et al.

Published: 2025-12-08
Subjects: Biodiversity, Forest Management

1. Social forestry is increasingly promoted as a means to achieve equitable resource governance while contributing to biodiversity conservation. Yet, empirical evidence on how effectively community-managed forests support biodiversity remains limited, particularly in tropical regions. 2. We assessed mammal communities in two contrasting social forestry contexts in Sumatra, Indonesia: (1) a [...]

There is no taxon-free lunch

Indrė Žliobaitė

Published: 2025-12-06
Subjects: Ecology and Evolutionary Biology

Over the last few decades, the term “taxon-free” has been widely used in paleoecological literature to highlight reasoning via ecomorphological or other functional traits of organisms as opposed to reasoning via taxonomic affiliations and phylogenetic conservatism. In practice, however, “taxon-free” inferences are very rarely free from using taxonomic information and occasionally they are even [...]

Gene expression and structural differences underpinning black and white colouration in spiders

Fabian C. Salgado-Roa, Devi Stuart-Fox, Laura Ospina-Rozo, et al.

Published: 2025-12-05
Subjects: Ecology and Evolutionary Biology, Entomology, Life Sciences

The presence of multiple colour variants within a single population, known as colour polymorphism, is a striking example of intraspecific phenotypic variation and a model for studying evolutionary processes. These processes depend on the underlying mechanisms such as the genes and pigments involved; but we currently lack such information for non-model groups such as arachnids. We examined the [...]

Butterfly abundances but not patch occupancy buffered by vegetation heterogeneity during climatic extremes

Natalie E. van Dis, Mirkka M. Jones, Pekka Niittynen, et al.

Published: 2025-12-05
Subjects: Ecology and Evolutionary Biology, Life Sciences

As extreme climatic events are becoming more frequent and intense, we need to understand what mechanisms could buffer populations from climate change impacts to ensure their persistence. Fragmented populations may be especially vulnerable to climate change, as exemplified by species with metapopulation dynamics, whose persistence is determined by a precarious balance between frequent local [...]

Identification of the Cichlid Fishes of Lake Malawi/Nyasa Part 3: Rhamphochromina and others.

George Francis Turner, Martin J Genner

Published: 2025-12-05
Subjects: Life Sciences

With an estimated 800-1000 species, the cichlid fishes of Lake Malawi represent the largest known adaptive radiation of vertebrates from common ancestry in a limited geographical area, in this case a single lake. Although they represent a major system for the study of evolution, and have considerable local economic value, the presence of so many closely-related and poorly known species presents [...]

Leveraging publicly available data to facilitate urban ecology and evolution

Shawn Anthony Arreguin, Joseph F Walker, Natalie L.R. Love

Published: 2025-12-04
Subjects: Life Sciences

The intensifying pace of urbanization has prompted researchers to investigate its ecological and evolutionary consequences more deeply, yet logistic and monetary challenges can impose a barrier to research. Publicly available databases offer scientists from broad backgrounds an opportunity to circumvent those barriers, enhancing participation in urban ecology and evolution. In conjunction with [...]

POLLEN ANALYSIS AS A REMOTE BIOLOGICAL SENSOR: USING MELISSOPALYNOLOGY AND SURFACE SOIL DATA FOR AN INTEGRATED LANDSCAPE SCALE VEGETATION ASSESSMENT IN SOUTH INDIA

J. Lazar, S. Prasad, R. Navya, et al.

Published: 2025-12-04
Subjects: Botany, Ecology and Evolutionary Biology, Entomology, Life Sciences, Other Ecology and Evolutionary Biology, Other Life Sciences, Other Plant Sciences, Plant Sciences

We use pollen assemblages from two sources, surface soil and bee pollen to characterize modern pollen spectra from contrasting landscapes, evaluate their potential as biological proxies complementing each other in reconstructing vegetation comprised of anemophilous and entomophilous plants. The bee pollen assemblages are from honeycombs and corbicular loads from Apis cerana and A. florea. We try [...]

African swine fever vs. COVID-19: only one virus mattered for wild boar hunting bags in Europe

Valentina Barukčić, Boštjan Pokorny, Jacopo Cerri, et al.

Published: 2025-12-04
Subjects: Life Sciences

Wild boar (Sus scrofa) populations have been steadily increasing across Europe in the last decades, due to the synergy between landscape modifications, the ecological plasticity of the species and global warming. However, since 2014, an increasing number of these populations have also been affected by African swine fever (ASF) and have experienced increased mortality. Moreover, in 2020 and 2021, [...]

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