Preprints
Filtering by Subject: Evolution
Genetic variation in non-structural carbohydrates in Plantago lanceolata is related to mowing intensity but not to regrowth ability
Published: 2021-10-23
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Non-structural carbohydrates (NSCs) are important storage reserves of plants, and they may play a key role in the plants’ ability to recover from disturbance events such as drought, fire, or biomass removal. In managed grasslands, plants regularly experience aboveground biomass removal by grazing or mowing. If NSCs influence plant tolerances to these damages, then land-use intensification could [...]
Transcription factors evolve faster than their structural gene targets in the flavonoid pigment pathway
Published: 2021-10-16
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Evolutionary transitions in flower color often trace back to changes in the flavonoid biosynthetic pathway and its regulators. In angiosperms, this pathway produces a range of red, purple, and blue anthocyanin pigments. Transcription factor (TF) complexes involving members of the MYB, bHLH, and WD40 protein families control the expression of pathway enzymes. Here, we investigate flavonoid pathway [...]
The age of flowering plants is unknown
Published: 2021-10-10
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
The origin of flowering plants (angiosperms) was one of the most transformative events in the history of our planet. Despite considerable interest from multiple research fields, numerous questions remain, including the age of the group as a whole. Recent studies have reported a perplexing range of estimates for the crown-group age of angiosperms, from ca. 140 Ma (Early Cretaceous) to 270 Ma [...]
Detecting (non)parallel evolution in multidimensional spaces: angles, correlations, and eigenanalysis
Published: 2021-09-30
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Parallelism between evolutionary trajectories in a trait space is often seen as evidence for repeatability of phenotypic evolution, and angles between trajectories play a pivotal role in the analysis of parallelism. However, many biologists have been ignorant on properties of angles in multidimensional spaces, and unsound uses of angles are common in the biological literature. To remedy this [...]
Learning from your mistakes: a novel method to predict the response to directional selection
Published: 2021-09-27
Subjects: Animal Sciences, Computational Biology, Ecology and Evolutionary Biology, Evolution, Genetics, Genetics and Genomics, Life Sciences, Other Ecology and Evolutionary Biology, Population Biology
Predicting how populations respond to selection is a key goal of evolutionary biology. The field of quantitative genetics provides predictions for the response to directional selection through the breeder’s equation. However, differences between the observed responses to selection and those predicted by the breeder’s equation occur. The sources of these errors include omission of traits under [...]
Many defense systems in microbial genomes, but which is defending whom from what?
Published: 2021-09-18
Subjects: Ecology and Evolutionary Biology, Evolution, Genetics and Genomics, Life Sciences, Microbiology, Other Microbiology
Prokaryotes have numerous mobile genetic elements (MGE) that mediate horizontal gene transfer between cells. These elements can be costly, even deadly, and cells use numerous defense systems to filter, control or inactivate them. Surprisingly, many phages, conjugative plasmids, and their parasites, phage satellites or mobilizable plasmids, encode defense systems homologous to those of bacteria. [...]
The importance of alternative splicing in adaptive evolution
Published: 2021-09-17
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Although alternative splicing is a ubiquitous gene regulatory mechanism in plants and animals, its contribution to evolutionary transitions is understudied. Splicing enables different mRNA isoforms to be generated from the same gene, expanding transcriptomic and proteomic diversity. While the role of gene expression in adaptive evolution is widely accepted, biologists still debate the functional [...]
Hybridization may promote variation in cognitive phenotypes in experimental guppy hybrids
Published: 2021-09-04
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Evolution, Life Sciences
Hybridization is an important mechanism of evolution. While hybrids often express inferior traits and are selected against, hybridization can promote phenotypic variation and produce trait combinations distinct from the parentals, generating novel adaptive potential. Among other traits, hybridization can impact behaviour and cognition and may reinforce species boundaries when hybrids show [...]
How to approach the study of syndromes in macroevolution and ecology
Published: 2021-09-02
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Syndromes, wherein multiple traits evolve convergently in response to a shared selective driver, form a central concept in ecology and evolution. Recent work has questioned the utility and indeed the existence of some of the classic syndromes, such as pollination and seed dispersal syndromes. Here, we discuss some of the major issues that have plagued research into syndromes in macroevolution. [...]
Decomposing phenotypic skew and its effects on the predicted response to strong selection
Published: 2021-08-31
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
The major frameworks for predicting evolutionary change assume that a phenotypes underlying genetic and environmental components are normally distributed. However, the predictions of these frameworks may no longer hold if distributions are skewed. Despite this, phenotypic skew has never been decomposed, meaning the fundamental assumptions of quantitative genetics remain untested. Here, we [...]
The effect of brief or prolonged bouts of winning or losing male-male contests on plasticity in sexually selected traits
Published: 2021-08-28
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Evolution, Life Sciences
Fight outcomes often affect male fitness by determining their access to mates. Thus ‘winner-loser’ effects, where winners often win their next contest, while losers tend to lose, can influence how males allocate resources towards pre- and post-copulatory traits. We experimentally manipulated the winning/losing experiences of pairs of size-matched male Gambusia holbrooki for either a day, a week [...]
Towards evolutionary predictions: current promises and challenges
Published: 2021-08-25
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Evolution has traditionally been a historical and descriptive science and predicting future evolutionary processes has long been considered impossible. However, evolutionary predictions are increasingly being developed and used in medicine, agriculture, biotechnology and conservation biology. Evolutionary predictions may be used for different purposes, such as to prepare for the future, to try [...]
The structure of evolutionary theory: Beyond Neo-Darwinism, Neo-Lamarckism and biased historical narratives about the Modern Synthesis
Published: 2021-08-10
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
The last decades have seen frequent calls for a more extended evolutionary synthesis (EES) that will supposedly overcome the limitations in the current evolutionary framework with its intellectual roots in the Modern Synthesis (MS). Some radical critics even want to entirely abandon the current evolutionary framework, claiming that the MS (often erroneously labelled “Neo-Darwinism”) is outdated, [...]
The evolutionary relevance of social learning and transmission of behaviors in non-social arthropods
Published: 2021-08-05
Subjects: Behavior and Ethology, Biology, Ecology and Evolutionary Biology, Entomology, Evolution, Life Sciences
Research on social learning has centered around vertebrates, but evidence is accumulating that small-brained, non-social arthropods also learn from others. Social learning can lead to social inheritance when socially acquired behaviors are transmitted to subsequent generations. Here, we first highlight the complementarities between social and classical genetic inheritance, using oviposition site [...]
Richard Lewontin (1929-2021): Evolutionary Biology’s Great Disrupter
Published: 2021-07-25
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
An appreciation of the career of the evolutionary biologist and activist Richard Lewontin (1929-2021)