Preprints
Filtering by Subject: Evolution
Within-colony segregation of foraging areas: from patterns to processes
Published: 2022-05-18
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Evolution, Life Sciences, Other Ecology and Evolutionary Biology
Spatial segregation of foraging areas among conspecifics breeding in different colonies has been observed in several colonial vertebrates and is assumed to originate from competition and information use. Segregation between sub-groups of foraging animals from the same colony (hereafter sub-colonies) has comparatively received limited attention, even though it may have strong impacts on colony [...]
Patterns of selection across gene regulatory networks
Published: 2022-04-25
Subjects: Cell and Developmental Biology, Ecology and Evolutionary Biology, Evolution, Life Sciences
Gene regulatory networks (GRNs) are the core engine of organismal development. If we would like to understand the origin and diversification of phenotypes, it is necessary to consider the structure of GRNs in order to reconstruct the links between genetic mutations and phenotypic change. Much of the progress in evolutionary developmental biology, however, has occurred without a nuanced [...]
Lessons learned from organizing and teaching virtual phylogenetics workshops
Published: 2022-04-15
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
In 2020 and 2021, the COVID-19 pandemic led to an abrupt overhaul of many academic practices, including the transition of scientific events, such as workshops, to a fully virtual format. We describe our experiences organizing and teaching online-only statistical phylogenetics workshops and the lessons we learned along the way. We found that online workshops present some specific challenges, but [...]
What Determines the Minimum Body Size for Vertebrates?
Published: 2022-04-07
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
The minimum body size of vertebrate species lies just above 6 millimeters, in stark contrast to the minimum sizes attained by species of other major taxonomic groups. This paper presents two connected hypotheses explaining this minimum size obtainable with a vertebrate Bauplan. Firstly, the complex bodies of vertebrates might not be amendable to reduction below a certain level of complexity. We [...]
Handling Character Dependency in Phylogenetic Inference: Extensive Performance Testing of Assumptions and Solutions Using Simulated Data
Published: 2022-04-07
Subjects: Animal Sciences, Bioinformatics, Ecology and Evolutionary Biology, Evolution, Life Sciences, Research Methods in Life Sciences
Character dependency is a major conceptual and methodological problem in phylogenetic inference of morphological datasets, as it violates the assumption of characters independency that is common to all phylogenetic methods. It is more frequently observed in higher-level phylogenies or in datasets characterizing major evolutionary transitions, as these represent parts of the tree of life where [...]
The evolution of conspicuousness in frogs: when to signal toxicity?
Published: 2022-04-06
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Evolution, Life Sciences
Many organisms use conspicuous color patterns to advertise their toxicity or unpalatability, a strategy known as aposematism. Despite the recognized benefits of this anti-predator tactic, not all chemically defended species exhibit warning coloration. Here, we use a comparative approach to investigate which factors predict the evolution of conspicuousness in frogs, a group in which conspicuous [...]
Reducing the biases in false correlations between discrete characters
Published: 2022-04-01
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences, Other Ecology and Evolutionary Biology
The correlation between two characters is often interpreted as evidence that there exists a significant and biologically important relationship between them. However, Maddison and FitzJohn (2015) recently pointed out that in certain situations find evidence of correlated evolution between two categorical characters is often spurious, particularly, when the dependent relationship stems from a [...]
Biofilm formation is intrinsic to the origin of life
Published: 2022-03-21
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Biofilm formation the build up of multicellular, often surface-associated, communities of autonomous cells, is the natural mode of growth of up to 80% of microorganisms living on this planet. Their tolerance against multiple environmental stresses makes biofilms refractory towards antimicrobial treatment strategies and the actions of the immune system. But how did biofilm formation arise? Here, I [...]
Defence mitigation by predators of chemically defended prey integrated over the predation cycle and across biological levels
Published: 2022-03-18
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
The long-term evolution of species involved in predator-prey interactions has resulted in many examples of specialised prey defences. The methods that predators use to mitigate prey defences has received less attention. The frequent reference to an arms races or coevolution without clear evidence that both strategies evolved under the influence of each other is problematic. In this review, we use [...]
Endosymbiosis or Bust: Influence of Ectosymbiosis on Evolution of Obligate Endosymbiosis
Published: 2022-03-08
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Endosymbiosis, symbiosis in which one symbiont lives inside another, is woven throughout the history of life and the story of its evolution. From the mitochondrion residing in almost every eukaryotic cell to the gut microbiome found in every human, endosymbiosis is a cornerstone of the biological processes that sustain life on Earth. While endosymbiosis is ubiquitous, many questions about its [...]
Keep Your Frenemies Closer: Bacteriophage That Benefit Their Hosts Evolve to be More Temperate
Published: 2022-03-08
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Bacteriophages, also known as phages, are viruses that infect bacteria. They are found everywhere in nature, playing vital roles in microbiomes and bacterial evolution due to the selective pressure that they place on their hosts. As obligate endosymbionts, phages depend on bacteria for successful reproduction, and either destroy their hosts through lysis or are maintained within the host through [...]
Technical comment on Negative-assortative mating for color in wolves
Published: 2022-03-08
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Hedrick et al. (2016) reported on "negative-assortative mating for color in wolves" from Yellowstone National Park, the "first documented case of significant negative-assortative mating in mammals." Here I report a logical inconsistency in their population genetic model that effectively imposes selection against some assortatively mating genotype. After pointing out this inconsistency, I derive [...]
Dirty Transmission Hypothesis: Increased Mutations During Horizontal Transmission Can Select for Increased Levels of Mutualism in Endosymbionts
Published: 2022-02-27
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
A mutualistic symbiosis occurs when organisms of different species cooperate closely for a net benefit over time. Mutualistic relationships are important for human health, food production, and ecosystem maintenance. However, they can evolve to parasitism or breakdown all together and the conditions that maintain and influence them are not completely understood. Vertical and horizontal [...]
Survival of the luckiest
Published: 2022-02-25
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences, Psychology, Social and Behavioral Sciences
Opposite dynamics are behind natural selection and sexual selection. While the fittest survives in natural selection, the survivor will most likely be the luckiest when both dynamics are combined.
Origins and evolution of biological novelty
Published: 2022-02-06
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Understanding the origins and impacts of novel traits has been a perennial interest in many realms of ecology and evolutionary biology. Here, we build on previous evolutionary and philosophical treatments of the subject to encompass novelties across biological scales and eco-evolutionary perspectives. By defining novelties as new features at one biological scale that have emergent effects at [...]