Preprints
Filtering by Subject: Evolution
Visual and olfactory cues of predation affect body and brain growth in the guppy
Published: 2020-12-15
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Evolution, Life Sciences
1. Phenotypic plasticity requires animals to acquire reliable environmental information. When multiple sources of information agree, cues should be perceived as reliable and induce a relatively strong response. Conversely, where stimuli conflict, animals must weigh the accuracy of the sources of information and responses should be reduced. 2. Availability of reliable information is often [...]
Adaptive ageing theory of faster adaptation and inconsistency of the conventional selection shadow evolutionary theory of ageing.
Published: 2020-11-27
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Selection shadow has been the conventional theory of evolution of ageing for decades. I argue that selection shadow is merely a phenomenon by which deleterious mutation will be inevitably passed on if they manifest only after mating. However, to explain prevalence of ageing, the authors of the conventional theory erroneously equated passing on and persistence by interpreting selection shadow as [...]
Maturation in Atlantic salmon (Salmo salar, Salmonidae): a synthesis of ecological, genetic, and molecular processes
Published: 2020-11-10
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Evolution, Genetics, Genetics and Genomics, Genomics, Life Sciences, Physiology, Population Biology
Over the past decades, Atlantic salmon (Salmo salar, Salmonidae) has emerged as a model system for sexual maturation research, owing to the high diversity of life history strategies, knowledge of trait genetic architecture, and their high economic value. The aim of this synthesis is to summarize the current state of knowledge concerning maturation in Atlantic salmon, outline knowledge gaps, and [...]
Transgenerational effects of temperature fluctuations in Arabidopsis thaliana
Published: 2020-11-10
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences, Population Biology
Plant stress responses can extend into the following generations, a phenomenon called transgenerational effects. Heat stress, in particular, is known to affect plant offspring, but we do not know to what extent these effects depend on the temporal patterns of the stress, and whether transgenerational responses are adaptive and genetically variable within species. To address these questions, we [...]
Non-additive genetic effects induce novel phenotypic distributions in male mating traits of F1 hybrids
Published: 2020-10-16
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Hybridization is a source of phenotypic novelty and variation because of increased additive genetic variation. Yet, the roles of non-additive allelic interactions in shaping phenotypic mean and variance of hybrids have been underappreciated. Here we examine the distributions of male-mating traits in F1 hybrids via a meta-analysis of 3,208 effect sizes from 39 animal species pairs. Although [...]
Epigenetics and the success of invasive plants
Published: 2020-10-13
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences, Plant Sciences
Biological invasions impose ecological and economic problems on a global scale, but also provide extraordinary opportunities for studying contemporary evolution. It is critical to understand the evolutionary processes that underly invasion success in order to successfully manage existing invaders, and to prevent future invasions. As successful invasive species sometimes are suspected to rapidly [...]
Differential effects of steroid hormones on levels of genetic variance in a wild bird: possible mechanism of maternal-effects x genetic variance interaction?
Published: 2020-08-20
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Genetic variation is one of the key concepts in evolutionary biology and an important prerequisite of evolutionary change. Still, we know very little about processes that modulate its levels in wild populations. In particular – we still are to understand why genetic variances often depend on environmental conditions. One of possible environment-sensitive modulators of observed levels of genetic [...]
Adaptation, Local Frequency-Dependent and Global Frequency-Independent Selection
Published: 2020-08-18
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences, Population Biology
There is a tension between, on the one hand, the view that natural selection produces adaptations, and on the other hand, the theoretical results showing that the links between natural selection are weakened in different evolutionary scenarios such as situations of (negative) frequency-dependent selection or more generally in situations where fitnesses are not constant. If these results are taken [...]
Evolution, Origins and Diversification of Parasitic Cnidarians
Published: 2020-08-17
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Parasitism has evolved in cnidarians on multiple occasions but only one clade – the Myxozoa – has undergone substantial radiation. We briefly review minor parasitic clades that exploit pelagic hosts and then focus on the comparative biology and evolution of the highly speciose Myxozoa and its monotypic sister taxon, Polypodium hydriforme, which collectively form the Endocnidozoa. Cnidarian [...]
Evolution in the Courtroom: Using Phylogenetics to Investigate Legal Claims of HIV Transmission
Published: 2020-07-29
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
DNA sequences have become ubiquitous across the biological sciences and are even embedded in the public psyche, perhaps most famously in the context of forensic science. A human being’s DNA changes very little over his or her lifetime, and this inherent stability lends itself well to positively identifying individuals using DNA samples. However, not all genomes are so stable, even over short [...]
Segmentation, body symmetry and the organization of the central nervous system in echinoderms
Published: 2020-07-26
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
The organization of the echinoderm central nervous system (CNS) is striking because it varies widely from that of other bilaterians; however, the basis for this is unknown. In the present paper, I identify echinoderms as compound and I show that this is the basis for their radial symmetry and the organization of their CNS. The asteroids, as I show, comprise of bilaterally symmetrical zooids [...]
Historical comparisons show evolutionary changes in drought responses in European plant species after two decades of climate change
Published: 2020-07-22
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
Plant populations must continuously adapt to ongoing global climate change, including warmer temperatures and more extreme weather events. One way to detect such evolutionary changes within plant populations is through historical comparisons where plants grown from seeds collected in the past (“ancestors”) are compared to freshly collected seeds from the same populations (“descendants”) in common [...]
The Diverse Applications of Tree Set Visualization and Exploration
Published: 2020-07-18
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
All phylogenetic studies are built around sets of trees. Tree sets carry different kinds of information depending on the data and approaches used to generate them, but ultimately the variation they contain and their structure is what drives new phylogenetic insights. In order to better understand the variation in and structure of phylogenetic tree sets, we need tools that are generic, flexible, [...]
New approaches for inferring phylogenies in the presence of paralogs
Published: 2020-07-08
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
The availability of whole genome sequences was expected to supply essentially unlimited data for phylogenetics. However, strict reliance on single-copy genes for this purpose has drastically limited the amount of data that can be used. Here, we review several approaches for increasing the amount of data used for phylogenetic inference, focusing on methods that allow for the inclusion of [...]
Life in fluctuating environments
Published: 2020-07-04
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences, Other Ecology and Evolutionary Biology, Terrestrial and Aquatic Ecology
Variability in the environment defines the structure and dynamics of all living systems. Organisms have evolved traits and strategies that allow them to detect, exploit and predict the changing environment. Organisms maintain steady internal conditions required for physiological functioning through feedback mechanisms that allow internal conditions to remain at or near a set point despite a [...]