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Preprints

There are 3242 Preprints listed.

Making use of oak genomes

Andrew L Hipp, Antoine Kremer

Published: 2026-05-14
Subjects: Biodiversity, Botany, Genomics, Life Sciences

This review summarizes the contributions of genomics to our understanding of oak evolution and management, both past and ongoing. Far from being exhaustive given the large number of publications following the publication of the genomes, this review emphasizes work conducted in the decade following publication of the first two complete oak genome assemblies, and major findings and achievements [...]

Nature finance: we need (some) offsets

Joseph W Bull

Published: 2026-05-14
Subjects: Biodiversity, Environmental Studies

Nature offsets – mechanisms that allow for negative environmental impacts (e.g. biodiversity loss, greenhouse gas emissions) to be fully compensated for and neutralized – are extremely widespread, but have become increasingly controversial, to the extent they are now starting to be precluded from new environmental policy developments. In turn, leaders are becoming more reticent about their [...]

The bacterial immune system: identifying evolved defense adaptations

Ellinor Alseth, Sam P Brown

Published: 2026-05-14
Subjects: Ecology and Evolutionary Biology, Evolution, Microbiology

The last few years have witnessed a rapid expansion of reported bacterial defense mechanisms. Alongside established mechanisms of defense against molecular parasites (e.g. CRISPR-Cas, restriction-modification), hundreds of novel defenses are being described each year, contributing to an ever-expanding ‘bacterial immune system’. Terms like ‘defense’ and ‘immune’ are often used as shorthand for an [...]

Harnessing hidden synergies in conservation planning: do “umbrella action plans” reduce redundancy and improve efficiency?

Stefano Lucchesi, Erin Wessling

Published: 2026-05-13
Subjects: Biodiversity

Conservation Action Plans (APs) are widely used to guide biodiversity interventions, but they are often developed in isolation, leading to redundancy and poorly coordinated implementation. We assess whether identifying thematic overlap among APs can reveal practical opportunities for coordination, and introduce the concept of Umbrella Action Plans (UAPs) as a framework to streamline conservation [...]

HARBOUR PORPOISE RESPONSES TO PILE DRIVING ARE BETTER PREDICTED BY DISTANCE TO SOURCE THAN BY ENERGY-BASED RECEIVED SOUND LEVELS

Paul M Thompson, Aude Benhemma-Le Gall, Barbara Cheney, et al.

Published: 2026-05-13
Subjects: Life Sciences

1. Regulatory assessments for offshore construction are required to avoid impacts on protected marine mammals through noise-related injury or disturbance. Criteria for injury risk are widely accepted, but the extent to which behavioural responses are related to noise levels or co-varying contextual factors such as proximity remains uncertain. 2. This study used arrays of echolocation detectors [...]

A Game-Theoretic and Dynamical-Systems Framework for Anti-Poaching Resource Allocation: A Case Study of Etosha National Park

Ka Hin Chan, Long Nam Ao, Weng Kin Loi, et al.

Published: 2026-05-12
Subjects: Biodiversity, Natural Resources and Conservation, Population Biology

Wildlife poaching threatens biodiversity across sub-Saharan Africa, and is especially acute for critically endangered species such as the black rhinoceros (Diceros bicornis). Etosha National Park, Namibia (22,935 km²), is patrolled by approximately 295 anti-poaching rangers—fewer than 0.02 per km²—posing two interlinked operational questions: where should a limited workforce be placed to maximise [...]

Livestock subsidise tiger diets in a central Indian corridor: implications for human-wildlife conflict management and conservation planning

Suvankar Biswas, Sparsh Dubey, Pranav Chanchani, et al.

Published: 2026-05-12
Subjects: Life Sciences

Large carnivores, like tigers, maintain a balance within their respective ecosystem and play a critical role. However, due to their life history needs and extensive overlap with humans, they face significant threats across their distribution. These threats become severe when they inhabit non-protected areas like corridors and kill livestock. In this study, the food habits of tiger were assessed [...]

An epibiotic association between burrowing and sessile bivalves on the Amazon continental shelf: implications for ecological facilitation in sediment-dominated environments

Jonata Arruda Francisco, Flavio de Almeida Alves-Júnior, Karolina Ferreira Rodrigues, et al.

Published: 2026-05-12
Subjects: Life Sciences, Terrestrial and Aquatic Ecology

From the perspective of ecological facilitation theory, we report an epibiotic association between two mollusk species with contrasting lifestyles, Chama macerophylla Gmelin, 1791 (sessile) and Tucetona pectinata (Gmelin, 1791) (burrowing), on the Amazon continental margin. Specimens were collected using a Van Veen dredge near the shelf break and in the vicinity of AP3 blocks recently offered for [...]

OdoCocktail-Japan: Primer sets to enrich environmental DNA of Japanese Odonata species

Satoshi Yamamoto, Naoki Katayama, Junsuke Yamasako, et al.

Published: 2026-05-12
Subjects: Biodiversity, Entomology, Terrestrial and Aquatic Ecology

Monitoring is essential to conserve and recover biodiversity. Environmental DNA (eDNA)-based metabarcoding analysis has been recognized as a cost-effective and efficient method to monitor species, but it still has limitations, such as insufficient reference databases and lack of primer sets suitable to detect target species. As biological indicators of freshwater habitats, Odonata species have [...]

Cold treatment benefits Mediterranean orchid seedlings cultivated in vitro

Gwenaëlle Deconninck, Argyrios Gerakis Gerakis, Victoria Chatzopoulou, et al.

Published: 2026-05-12
Subjects: Biology, Ecology and Evolutionary Biology, Life Sciences, Other Ecology and Evolutionary Biology, Plant Biology, Plant Sciences

1. Effective ex situ propagation is increasingly critical for the conservation and restoration of terrestrial orchids threatened by habitat loss, over-collection and climate change. However, large-scale propagation remains constrained by developmental bottlenecks during the transition from protocorms to established plantlets with storage organs. Cold exposure is often recommended to improve [...]

Hybridization in Animal Evolution

Kelsie Hunnicutt, Molly Schumer

Published: 2026-05-11
Subjects: Ecology and Evolutionary Biology, Life Sciences

In the past two decades, it has become clear that hybridization is so common in animal species as to be an almost universal feature of their evolutionary histories. Remnants of both ancient and contemporary hybridization events are present in the genomes of modern species, but their consequences are still not completely understood. In this review, we synthesize what is known about the [...]

Catalyzing transformative change for climate and biodiversity finance within COP policy discourses

Sara Löfqvist, Giacomo Delgado, Sophus O.S.E zu Ermgassen, et al.

Published: 2026-05-11
Subjects: Environmental Policy, Environmental Studies, Other Political Science

Recent outcomes of the Conferences of the Parties (COP) to the UNFCCC and CBD emphasize the need for transformative change to meet global climate and biodiversity targets. Yet climate and biodiversity finance discourses remains dominated by efforts to close ‘funding gaps’, with comparatively little attention to systemic drivers of climate change, nature loss, and social injustice. Here we analyze [...]

Sexually antagonistic selection: a review of the theory and its implications

Ewan Flintham, Thomas Lesaffre, Sarah Otto, et al.

Published: 2026-05-09
Subjects: Ecology and Evolutionary Biology, Evolution, Population Biology

Sexually antagonistic selection arises when females and males have different fitness optima for traits with a shared genetic basis, so that the same alleles are favoured in one sex but disfavoured in the other. It has been implicated in a wide range of ecological and evolutionary processes, from the maintenance of a sex load to the evolution of sex chromosomes. Mathematical models have long been [...]

Robustness of pesticide and other environmental stressors as key drivers of stream macroinvertebrates in small agricultural catchments

Hanh H. Nguyen, Verena C. Schreiner, Ralf B. Schäfer

Published: 2026-05-09
Subjects: Agriculture, Biodiversity, Life Sciences

Robustness of multiple stressor rankings is essential for credible ecotoxicological assessments and policy guidance. A widely cited study of 101 small agricultural streams across Germany identified pesticide mixtures as the dominant stressor for stream macroinvertebrates, but its analytical robustness has since been questioned. Using a fully reproducible workflow, we reanalysed this dataset to [...]

Optimizing sampling and monitoring of species interactions within Biodiversity Observation Networks

Gabriel Dansereau, Michael D. Catchen, Ceres Barros, et al.

Published: 2026-05-09
Subjects: Biodiversity, Ecology and Evolutionary Biology

Optimal monitoring strategies should be designed to efficiently monitor all essential facets of biodiversity. Yet, species interactions are often overlooked in monitoring designs compared to spatial coverage and species richness, partly due to the inherent difficulty of sampling and monitoring interactions compared to species distributions. Here, we used simulations to test the efficiency of [...]

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