Preprints
Filtering by Subject: Biology
The Risk of Avian Influenza in the Southern Ocean: A practical guide
Published: 2022-08-22
Subjects: Animal Sciences, Biology, Immunology and Infectious Disease, Life Sciences
Advice from Avian Influenza experts suggests that there is a high risk that Highly Pathogenic Avian Influenza will arrive in the Southern Ocean 2022/23-2024/25 austral summers. Since the beginning of 2022, the increasing intensity of highly pathogenic avian influenza (HPAI) H5N1 outbreaks has resulted in the death of hundreds of thousands of seabirds in the Northern Hemisphere, around the [...]
Experimental validation of transposable element insertions using the Polymerase Chain Reaction (PCR)
Published: 2022-07-30
Subjects: Biology, Ecology and Evolutionary Biology, Evolution, Life Sciences
Transposable elements (TEs), also known as transposons, are repetitive DNA sequences, present in virtually all organisms, that can move from one genomic position to another. TEs can be a source of mutations with important consequences for organisms. Despite their interest, its repetitive nature has made their study very challenging. However, the emergence of new sequencing technologies that allow [...]
European light skin may have evolved as an adaptation to the Neolithic sedentary lifestyle
Published: 2022-07-27
Subjects: Bioinformatics, Biology, Ecology and Evolutionary Biology, Evolution, Life Sciences, Population Biology
Light skin facilitates the penetration of ultraviolet light (UV) radiation through the skin, increasing the synthesis of vitamin D that in turn stimulates bone formation. It has been suggested that light skin appeared in the ancestors of modern Europeans as an adaptation to the conditions of low UV radiation in high latitudes; however, paleogenetic studies have recently shown it did not evolve [...]
Social niche shapes social behavior and cortisol concentrations during adolescence in female guinea pigs
Published: 2022-07-15
Subjects: Behavior and Ethology, Biology, Ecology and Evolutionary Biology, Life Sciences
Individualized social niches arise in social groups and are associated with behavior and hormone (e.g. cortisol) concentrations. During sensitive life phases, social interactions can have a profound impact on the development of social behavior. Focusing on adolescence, we aimed to investigate the relationship between the social niche, social behavior, and cortisol concentrations (baseline and [...]
The coevolutionary mosaic of bat betacoronavirus emergence risk
Published: 2022-07-01
Subjects: Biodiversity, Bioinformatics, Biology, Biotechnology, Cell and Developmental Biology, Ecology and Evolutionary Biology, Immunology and Infectious Disease, Life Sciences, Other Ecology and Evolutionary Biology, Other Life Sciences
Pathogen evolution is one of the least predictable components of disease emergence, particularly in nature. Here, building on principles established by the geographic mosaic theory of coevolution, we develop a quantitative, spatially-explicit framework for mapping the evolutionary risk of viral emergence. Driven by interest in diseases like SARS, MERS, and COVID-19, we examine the global [...]
PHENOTYPIC PLASTICITY MADE SIMPLE, BUT NOT TOO SIMPLE
Published: 2022-06-29
Subjects: Biology, Ecology and Evolutionary Biology, Evolution, Life Sciences
Phenotypic plasticity refers to environment-dependent trait expression (Dewitt and Scheiner, 2004). Knowledge of phenotypic plasticity is important in virtually all areas of basic and applied biology. Researchers in applied fields (such as agriculture, medicine, public health, wildlife management, and conservation biology) have a vested interest in knowing how traits are or will be expressed [...]
The vocal apparatus of bats: an understudied tool to reconstruct the evolutionary history of echolocation?
Published: 2022-06-12
Subjects: Animal Sciences, Biology, Ecology and Evolutionary Biology, Evolution, Life Sciences, Other Ecology and Evolutionary Biology, Zoology
Until recently, bat phylogeny separated megabats (laryngeally non-echolocators) and microbats (all laryngeal echolocators) into two distinct clades. This segregation was consistent with the assumption that laryngeal echolocation was acquired by a common ancestor and inherited by all microchiropterans. Thus, laryngeal echolocation was regarded to have evolved once. Recent advances in bat genome [...]
Human disturbance decreases dominance in riparian plant communities
Published: 2022-06-03
Subjects: Biology, Life Sciences
Conservation science usually devotes little attention to common species, which are crucial in determining ecosystem structure and function. Dominant species are a particular type of common species that affect ecosystem functions proportional to their abundance or cover. In this study, we examined how human disturbance affects the cover of the dominant riparian species in 404 sites located in [...]
Brain morphology correlates of learning and cognitive flexibility in a fish species (Poecilia reticulata)
Published: 2022-05-02
Subjects: Animal Sciences, Biology, Life Sciences, Zoology
Determining how variation in brain morphology affects cognitive abilities is important to understand inter-individual variation in cognition and, ultimately, cognitive evolution. Yet, despite many decades of research in this area, there is surprisingly little experimental data available from assays that quantify cognitive abilities and brain morphology in the same individuals. Here, we tested [...]
Multi-population analysis reveals spatial consistency in drivers of population dynamics of a declining migratory bird
Published: 2022-04-21
Subjects: Biodiversity, Biology, Biostatistics, Ecology and Evolutionary Biology, Life Sciences, Longitudinal Data Analysis and Time Series, Physical Sciences and Mathematics, Population Biology, Research Methods in Life Sciences, Statistical Methodology, Statistical Models, Statistics and Probability, Survival Analysis, Terrestrial and Aquatic Ecology
Many migratory species are in decline across their geographical ranges. Single-population studies can provide important insights into drivers at a local scale, but effective conservation requires multi-population perspectives. This is challenging because relevant data are often hard to consolidate, and state-of-the-art analytical tools are typically tailored to specific datasets. We capitalized [...]
Towards a cohesive understanding of ecological complexity
Published: 2022-04-15
Subjects: Bioinformatics, Biology, Ecology and Evolutionary Biology, Life Sciences, Systems Biology
Understanding phenomena typical of complex systems is key for progress in ecology and conservation amidst escalating global environmental change. However, myriad definitions of complexity hamper conceptual advancements and synthesis. Ecological complexity may be better understood by following the strong theoretical basis of complexity science. We conduct bibliometric and text-mining analyses to [...]
Hematological and Biochemical Reference Intervals of the Visayan Warty Pig in Negros Occidental, Philippines
Published: 2022-03-24
Subjects: Animal Sciences, Biodiversity, Biology, Forest Biology, Forest Sciences, Laboratory and Basic Science Research Life Sciences, Life Sciences, Other Animal Sciences, Other Life Sciences, Physiology, Zoology
The Visayan warty pig is one of the endemic species of the Philippines that have been listed as "critically endangered." Conservation actions and efforts, such as health assessments, are being carried out to preserve the population. However, there is limited information about the normal hematological and biochemical profile of the species. The study presents reference intervals essential for [...]
Evidence-based Protection of Sea Turtle Eggs and Hatchery Practices
Published: 2022-03-24
Subjects: Biodiversity, Biology, Ecology and Evolutionary Biology, Life Sciences, Marine Biology
It is important for emerging conservationists and wildlife managers to gain experience in the use of evidence-based conservation, by way of critical analysis and understanding of the context and application of conservation actions. We developed a teaching case and activity for undergraduate and graduate courses in conservation biology, wildlife management etc., although it could also be adopted [...]
Urban food forestry transforms fine-scale soil function for rapid and uniform carbon sequestration
Published: 2022-03-21
Subjects: Biology, Ecology and Evolutionary Biology, Life Sciences, Other Ecology and Evolutionary Biology
Urbanization displaces agriculture and natural ecosystems, constraining food security and carbon (C) sinks. A proposed solution, Urban Food Forestry (UFF), promises local food from trees that can sequester C faster than other land cover types as long as soil function improves. We compared fine-scale variation in soil physical, chemical and biological properties within and between UFF and [...]
The Global Forest Health Crisis: A Public Good Social Dilemma in Need of International Collective Action
Published: 2022-03-10
Subjects: Agricultural and Resource Economics, Agricultural Economics, Agricultural Science, Agriculture, Behavioral Economics, Biodiversity, Biology, Biosecurity, Botany, Economics, Entomology, Environmental Microbiology and Microbial Ecology Life Sciences, Environmental Studies, Forest Biology, Forest Management, Forest Sciences, International Relations, Life Sciences, Microbiology, Other Forestry and Forest Sciences, Other Plant Sciences, Pathogenic Microbiology, Plant Biology, Plant Pathology, Plant Sciences, Political Science, Science and Technology Studies, Social and Behavioral Sciences
Society is confronted by interconnected threats to ecological sustainability. Among these is the devastation of forests by destructive non-native pathogens and insects introduced through global trade, leading to the loss of critical ecosystem services and a global forest health crisis. We argue that the forest health crisis is a public good social dilemma and propose a response framework that [...]