Preprints
Filtering by Subject: Ecology and Evolutionary Biology
New technology for an ancient fish: A lamprey life cycle modeling tool with an R Shiny application
Published: 2024-11-25
Subjects: Applied Mathematics, Applied Statistics, Ecology and Evolutionary Biology, Life Sciences, Marine Biology, Natural Resources and Conservation, Natural Resources Management and Policy, Population Biology, Systems Biology, Terrestrial and Aquatic Ecology
Lampreys (Petromyzontiformes) are an ancient group of fishes with complex life histories. We created a life cycle model that includes an R Shiny interactive web application interface to simulate abundance by life stage. This will allow scientists and managers to connect available demographic information in a framework that can be applied to questions regarding lamprey biology and conservation. We [...]
Causes of recent changes in bill length in Crozet wandering albatross, a long-lived seabird
Published: 2024-11-21
Subjects: Ecology and Evolutionary Biology, Evolution, Population Biology
Phenotypes are changing in many wild populations, largely in response to environmental changes due to human activities. Phenotypic change can be driven by several mechanisms, with contrasted consequences for the persistence of populations. Identifying those mechanisms is key to understand current responses to human pressures and to predict the future fate of populations. Here we attempt to [...]
Experimentally-induced low flows reveal climate change may shrink trophic niches of mountain stream predators.
Published: 2024-11-21
Subjects: Ecology and Evolutionary Biology
Climate change is projected to decrease snowpack and advance snowmelt in mountain ranges globally–including in California’s Sierra Nevada, where streamflow in snow-dominated rivers is expected to peak up to 2 months earlier, and remain in baseflow conditions for extended periods of time. Predators may be particularly sensitive to low flows, owing to their larger body sizes, higher metabolic [...]
Effect of bulb type on moth trap catch and composition in UK gardens
Published: 2024-11-15
Subjects: Biodiversity, Ecology and Evolutionary Biology, Entomology, Research Methods in Life Sciences
Abstract 1. A wide variety of light sources are employed to trap moths, differing in brightness and spectrum. Relatively little is known about how these factors affect the resulting sample. 2. We analyse 7 moth trap bulb types using 10 years of records from the Garden Moth Scheme to provide the largest and most comprehensive comparison of moth trap bulb types to date. 3. 125W Mercury Vapour (MV) [...]
Do behavioural ecologists misuse the term multivariate?
Published: 2024-11-14
Subjects: Ecology and Evolutionary Biology
Clear communication of procedures and findings is critical for scientific progress. One problem facing many research disciplines is the incorrect labelling in the literature of multivariable (i.e. many Xs) statistical models as multivariate (many Ys). Multivariate and multivariable statistical models are different statistical approaches and should be described as such. I assessed whether [...]
Gut microbiome composition and function – including transposase gene abundance - varies with age, but not senescence, in a wild vertebrate
Published: 2024-11-14
Subjects: Bioinformatics, Ecology and Evolutionary Biology, Life Sciences, Microbiology, Ornithology
Studies on wild animals, mostly undertaken using 16S metabarcoding, have yielded ambigous evidence regarding changes in the gut microbiome (GM) with age and senescence. Furthermore, variation in GM function has rarely been studied in such wild populations, despite GM metabolic characteristics potentially being associated with host senescent declines. Here, we used seven years of longitudinal [...]
Advancing the spatiotemporal dimension of wildlife–pollution interactions
Published: 2024-11-14
Subjects: Animal Sciences, Behavior and Ethology, Biology, Ecology and Evolutionary Biology, Environmental Health Life Sciences, Life Sciences, Other Animal Sciences, Other Ecology and Evolutionary Biology, Other Pharmacology, Toxicology and Environmental Health, Pharmacology, Toxicology and Environmental Health, Toxicology, Zoology
Chemical pollution is a pervasive problem and is now considered the fastest-growing agent of global environmental change. Numerous pollutants are known to disrupt animal behaviour, alter ecological interactions, and shift evolutionary trajectories. Crucially, both chemical pollutants and individual organisms are non-randomly distributed throughout the environment. Despite this, the current [...]
Choosing friends in an uncertain world: information reduces relationship stability in a Bayesian learning model of cooperative partnership
Published: 2024-11-14
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Life Sciences
Social animals often form differentiated social relationships with conspecifics. Developing closer partnerships with some than others can facilitate cooperative interactions in which individuals share resources or risk. When choosing a partner, individuals face a decision: a known partner might be sub-optimal if better options are available, but switching partners can be risky if others' [...]
Pollinator ethanology: A comment on Bowland et al.
Published: 2024-11-13
Subjects: Animal Sciences, Behavior and Ethology, Biology, Ecology and Evolutionary Biology, Entomology, Evolution, Integrative Biology, Life Sciences, Nutrition, Pharmacology, Toxicology and Environmental Health, Toxicology, Zoology
An integrated approach to above- and below-ground ecological monitoring for nature-based solutions
Published: 2024-11-12
Subjects: Agricultural Science, Biodiversity, Ecology and Evolutionary Biology, Life Sciences
1. As the development of nature-based solutions (NbS) increases globally, it is important to ensure that projects meet the objective of benefiting biodiversity, alongside tackling societal challenges. However, most NbS projects do not directly monitor ecological outcomes, and those that do often focus on a limited set of metrics. It is therefore challenging to assess whether projects fulfil the [...]
Frequency-dependence favors social plasticity and facilitates socio-eco-evolutionary feedback in fluctuating environments
Published: 2024-11-12
Subjects: Ecology and Evolutionary Biology, Integrative Biology
1. Increasing attention is being devoted to the study of phenotypic plasticity in social environments. However, much remains unknown about the selection pressures driving the evolution of social plasticity, as well as the pathways by which social plasticity may facilitate or constrain feedback between ecological and evolutionary dynamics. Here we explore these questions using quantitative genetic [...]
Population genetics of rainforest mountain frogs (Anura: Limnodynastidae: Philoria) severely impacted by the Australian megafires
Published: 2024-11-11
Subjects: Ecology and Evolutionary Biology
The 2019/20 Australian megafires impacted numerous species, including six of the seven montane frog species in the genus Philoria, which are confined to isolated rainforest habitats across high-altitude areas in eastern Australian Gondwonan rainforest. Using single nucleotide polymorphisms, we examined the genetic structure and diversity of the six northern Philoria species to inform conservation [...]
Conformal Prediction quantifies the uncertainty of Species Distribution Models
Published: 2024-11-11
Subjects: Ecology and Evolutionary Biology, Life Sciences
Providing accurate estimates of uncertainty is key for the analysis, adoption, and interpretation of species distribution models. In this manuscript, through the analysis of data from an emblematic North American cryptid, I illustrate how Conformal Prediction allows fast and informative uncertainty quantification. I discuss how the conformal predictions can be used to gain more knowledge about [...]
Reliability of meta-analyses in ecology and evolution: (mostly) good news from a case study on sexual signals
Published: 2024-11-09
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Evolution
Meta-analyses are powerful synthesis tools that are popular in ecology and evolution due to the rapidly growing literature of this field. Although the usefulness of meta-analyses depends on their reliability, such as the precision of individual and mean effect sizes, attempts to reproduce meta-analyses’ results remain rare in ecology and evolution. Here, we assess the reliability of 41 [...]
Evolutionarily Optimal Phage Life-History Traits
Published: 2024-11-09
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences, Microbiology, Population Biology
Optimal phage life-history traits are computed from data on phenotypic tradeoffs presented in De Paepe and Tadei (2006). A parameter is introduced, l_e, that describes the loss of virions in the environment. Hygienic interventions increase l_e. The optimal burst size decreases with l_e and the optimal capsid thickness increases with l_e. The optimal viral fitness also decreases with l_e. An [...]