Preprints
Filtering by Subject: Ecology and Evolutionary Biology
neonPlantEcology: an R package for preparing NEON plant data for use in ecological research
Published: 2024-01-17
Subjects: Ecology and Evolutionary Biology, Life Sciences
The National Ecological Observatory Network (NEON) is a continental-scale endeavor of ecological data collection for 30 years. We created a software package, neonPlantEcology that automatically arranges the raw data from the plant presence and percent cover (DP1.10058.001) data product from NEON into tables familiar to plant ecologists. Because of the broad scale of the observatory, it is [...]
Asteraceae in isolation: diversity and island biogeography of the largest plant family
Published: 2024-01-16
Subjects: Ecology and Evolutionary Biology, Life Sciences
The hyperdiverse plant family Asteraceae, with over 32,000 species globally, forms an iconic component of island floras, including many spectacular radiations, but a global picture of their insular diversity is lacking. Here, we uncover the global biogeographical and evolutionary patterns of Asteraceae on islands to reveal the magnitude and potential causes of their evolutionary success. We [...]
A big data and machine learning approach for monitoring the condition of ecosystems
Published: 2024-01-16
Subjects: Applied Statistics, Biodiversity, Bioinformatics, Earth Sciences, Ecology and Evolutionary Biology, Environmental Sciences, Forest Biology, Forest Sciences, Life Sciences, Other Ecology and Evolutionary Biology, Physical Sciences and Mathematics, Statistical Methodology, Statistical Models, Terrestrial and Aquatic Ecology
Ecosystems are highly valuable as a source of goods and services and as a heritage for future generations. Knowing their condition is extremely important for all management and conservation activities and public policies. Until now, the evaluation of ecosystem condition has been unsatisfactory and thus lacks practical implementation for most countries. We propose that ecosystem integrity is a [...]
Incubation behaviour of a boreal, food-caching passerine nesting in sub-zero temperatures
Published: 2024-01-14
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology
Our understanding of avian incubation behaviour is primarily derived from species that nest in the temperate conditions of spring and summer. This leaves uncertainties about strategies employed by a relatively small number of species adapted to breed under sub-zero, winter-like conditions. We used in-nest temperature loggers (iButtons) to monitor incubation behaviours of Canada Jays, [...]
Dense Sampling Phylogenomics Reveals Highly Dynamic Evolution of Batesian Mimicry Accuracy in Two Clades of Myrmecomorphic Spiders
Published: 2024-01-14
Subjects: Animal Sciences, Ecology and Evolutionary Biology, Genetics and Genomics
Batesian mimicry is an impressive example of convergent evolution driven by predation. However, the observation that many mimics only superficially resemble their models despite strong selective pressures is an apparent paradox. Here, we tested whether inaccurate mimicry represents an optimized or transitional stage at the macro-evolutionary scale by performing the hereto largest phylogenetic [...]
Animal social networks are robust to changing association definitions
Published: 2024-01-12
Subjects: Animal Sciences, Behavior and Ethology, Ecology and Evolutionary Biology, Life Sciences, Ornithology
The interconnecting links (edges) between individuals (nodes) in an animal social network are often defined by discrete, directed behaviours (interactions). However, where interactions are difficult to observe, a network edge is instead defined as individuals sharing space or overlapping in time (an association). Despite an increasingly accessible toolkit to assemble and analyse animal social [...]
Vulnerability of amphibians to global warming
Published: 2024-01-11
Subjects: Ecology and Evolutionary Biology, Life Sciences
Amphibians are the most threatened vertebrates, yet their resilience to rising temperatures remains poorly understood. This is primarily because knowledge of thermal tolerance is taxonomically and geographically biased, compromising global climate vulnerability assessments. Here, we employed a phylogenetically-informed data imputation approach to predict the heat tolerance of 60% of amphibian [...]
Meta-analysis reveals that the effects of precipitation change on soil and litter fauna in forests depend on body size
Published: 2024-01-11
Subjects: Biodiversity, Ecology and Evolutionary Biology, Terrestrial and Aquatic Ecology
Anthropogenic climate change is altering precipitation regimes at a global scale. While precipitation changes have been linked to changes in the abundance and diversity of soil and litter invertebrate fauna in forests, general trends have remained elusive due to mixed results from primary studies. We used a meta-analysis based on 352 comparisons from 30 primary studies to address associated [...]
The role of deadwood in the carbon cycle: Implications for models, forest management, and future climates
Published: 2024-01-10
Subjects: Biogeochemistry, Earth Sciences, Ecology and Evolutionary Biology, Environmental Sciences, Forest Biology, Forest Management, Forest Sciences, Life Sciences, Natural Resources and Conservation, Natural Resources Management and Policy, Plant Biology, Plant Sciences, Terrestrial and Aquatic Ecology
Deadwood represents a significant carbon pool in forests and savannas. Although previous research has focused mainly on forests, we synthesise deadwood studies across all ecosystems with woody vegetation. Storage and release of carbon from deadwood is controlled by interacting decomposition drivers including biotic consumers (animals, microbes) and abiotic factors (water, fire, sunlight, [...]
An integrated open population distance sampling approach for modelling age-structured populations
Published: 2024-01-09
Subjects: Ecology and Evolutionary Biology, Life Sciences, Population Biology
Estimation of abundance and demographic rates for populations of wild species is a challenging but fundamental issue for both management and research into ecology and evolution. One set of approaches that has been used extensively to estimate abundance of wildlife populations is Distance Sampling (DS) methods for line or point transect survey data. Historically, DS models were only available as [...]
Solving the “small outbreak problem” in climate epidemiology
Published: 2024-01-04
Subjects: Climate, Diseases, Ecology and Evolutionary Biology, Entomology, Environmental Public Health, Epidemiology, Life Sciences, Microbiology, Parasitic Diseases, Public Health, Virus Diseases
Climate change can cause outbreaks of infectious diseases in unfamiliar locations — but how do we know which unusual outbreaks are the result of climate change? Scientists often hesitate to guess, leaving the task to journalists or the public. All of these audiences would benefit from a clear and consistent framework for thinking about causality, especially in situations where outbreaks are too [...]
Quantifying heritability of the environment using animal models: a case study
Published: 2024-01-03
Subjects: Ecology and Evolutionary Biology
Evolutionary ecology has traditionally studied how natural selection shapes the phenotypes of individuals in response to their environment, which increases population fitness. It is also well known how habitat choice can affect individual local adaptation. However, recent work has highlighted the incompleteness of the link between habitat choice and its evolutionary consequences. By treating the [...]
Biogeographical diet variation within and between the rabbitfishes Siganus corallinus, Siganus virgatus, Siganus doliatus and Siganus trispilos
Published: 2023-12-27
Subjects: Ecology and Evolutionary Biology, Life Sciences, Other Ecology and Evolutionary Biology
Feeding habits of herbivorous fish play an important role in the form and function of coastal marine ecosystems. Rabbitfishes (Siganidae) have been recognized as important consumers of macroalgae in the coral reefs of the Indo-Pacific region. However, it is unclear how their diet varies among and within species at biogeographical scales. The present study assessed the inter- and intra-specific [...]
Untangling the complex food webs of tropical rainforest streams
Published: 2023-12-23
Subjects: Ecology and Evolutionary Biology, Life Sciences
1- Food webs depict the tangled web of trophic interactions associated with the functioning of an ecosystem. Understanding the mechanisms providing stability to these food webs is therefore vital for conservation efforts and management of natural systems.2- Here, we first characterised a tropical stream meta food web and five individual food webs using a Bayesian Hierarchical approach unifying [...]
A structured approach for building multi-community state-and-transition models to support conservation planning
Published: 2023-12-20
Subjects: Biodiversity, Ecology and Evolutionary Biology
Global declines in ecosystem extent and condition mean there is an increasing demand for recovery and conservation plans. Conservation plans for ecological communities require a management framework with measurable, time-bound objectives. Efficient and structured processes that facilitate timely and comparable conservation plans are essential, especially where resources are constrained. We [...]