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Preprints

Filtering by Subject: Ecology and Evolutionary Biology

Genomic data confirms that mutation cannot restore genetic diversity lost through population bottlenecks

Toby Gregory Laszlo Kovacs, Simon Y. W. Ho, Carolyn J. Hogg, et al.

Published: 2025-06-13
Subjects: Ecology and Evolutionary Biology, Genomics, Life Sciences, Molecular Genetics, Population Biology

Maintaining within-species genetic diversity is a critical goal of biodiversity conservation as it determines a species’ ability to adapt to environmental change. Without human intervention, isolated populations can only recover genetic diversity post-bottleneck through the accumulation of new mutations over evolutionary timescales. Using recent estimates of mutation rates from major genomic [...]

Historical and Potential Future Importance of Marine Megafauna Subsidies to Terrestrial Ecosystems

Francis David Gerraty, Charles A Braman, Jenifer E. Dugan, et al.

Published: 2025-06-12
Subjects: Ecology and Evolutionary Biology

Marine megafauna exert tremendous influence on the structure and function of ocean ecosystems, yet mounting evidence shows that their ecological impacts also cross the land-sea interface and modify terrestrial ecosystem dynamics. Marine megafauna connect land and sea by serving as large, calorically-rich food sources for terrestrial consumers and by transferring marine-derived nutrients onto land [...]

Colorful birds face heightened extinction risk around the world

Montague Neate-Clegg, Natalia Ocampo-Peñuela

Published: 2025-06-10
Subjects: Biodiversity, Ecology and Evolutionary Biology, Environmental Studies, Life Sciences, Ornithology

Many of the functional traits that mediate extinction risk across the tree life relate indirectly to a species’ ability to persist in a changing world. Yet, there are certain traits such as coloration that directly affect human interactions with wildlife. Here, we use an existing dataset of color metrics for 4334 passerine bird species combined with global functional trait data to determine [...]

The interplay between ecological networks drives host-plasmid community dynamics

Ying-Jie Wang, Kaitlin Schaal, Johannes Nauta, et al.

Published: 2025-06-10
Subjects: Ecology and Evolutionary Biology, Life Sciences

Plasmids can accelerate host adaptation through horizontal gene transfer and are key members of microbial communities. Plasmid infection dynamics are potentially affected by the interplay between the structures of host-plasmid and plasmid-plasmid interactions. However, how the structures of these networks jointly affect plasmid transmission and community dynamics remains unstudied. We used an [...]

Systematic mapping and bibliometric analysis of meta-analyses on animal cognition

Ayumi Mizuno, Malgorzata Lagisz, Pietro Pollo, et al.

Published: 2025-06-03
Subjects: Ecology and Evolutionary Biology, Psychiatry and Psychology

Meta-analyses play an important role in empirically synthesising research and guiding future directions. The field of animal cognition is rapidly expanding, with both empirical and review papers increasing at a faster rate than those in the life sciences overall. However, the use of meta-analyses, their methodological rigour, and the geographic distribution of research activity remain unclear. We [...]

Relative High Fitness and Genome-wide Diversity May Facilitate Plastic and Active Foragers' Diversification

Dylan J Padilla Perez, Martha M. Muñoz, David K Skelly

Published: 2025-06-03
Subjects: Ecology and Evolutionary Biology, Life Sciences

Explaining the variation in diversification rates across the Tree of Life is an important challenge for evolutionary biologists. Growing evidence suggests that key innovations or historical contingency give rise to high diversification rates, but the genetic mechanisms through which this process may occur remain poorly investigated. Based on fitness landscapes, a high diversification is [...]

Seabird range contraction and dispersal under climate change

Jorge Avaria-Llautureo, Marcelo M Rivadeneira, Chris Venditti, et al.

Published: 2025-06-03
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences

Many marine ectotherms have historically adapted to local climate change by evolving smaller body sizes, reducing their energy demands in warmer waters but limiting their dispersal and speciation rate. Whether endothermic marine species respond similarly remains unclear, as temperature minimally affects their size diversity, and the drivers of their dispersal and speciation are poorly understood. [...]

Towards causal predictions of site-level treatment effects for applied ecology

Eleanor E. Jackson, Tord Snäll, Emma Gardner, et al.

Published: 2025-06-03
Subjects: Ecology and Evolutionary Biology

With limited land and resources available to implement conservation actions, efforts must be effectively targeted to individual places. This demands predictions of how individual sites respond to alternative interventions. Meta-learner algorithms for predicting individual level treatment effects (ITEs) have been pioneered in marketing and medicine, but they have not been tested in ecology. We [...]

Spatial and environmental influences on the assembly of silk microbiomes in a social spider

Kara J.M. Taylor, Steven T. Cassidy, Peter R. Marting, et al.

Published: 2025-06-03
Subjects: Ecology and Evolutionary Biology, Environmental Microbiology and Microbial Ecology Life Sciences, Life Sciences

In nesting animals, the built environment can play an important role in host-associated microbiome assembly. However, the sources and processes structuring the resulting microbiome remain underexplored. In the social spider Stegodyphus dumicola, philopatric sisters collectively build and maintain a silken nest, capture prey, and exhibit alloparental care. We used S. dumicola as a test system to [...]

Suspended particulates decline along a dense, small-stream mussel bed

Jillian Fedarick, Daniel J. Hornbach, Bernard E. Sietman

Published: 2025-06-02
Subjects: Ecology and Evolutionary Biology, Other Ecology and Evolutionary Biology

Water filtration by freshwater mussels is a valued ecosystem service; however, it has not been well studied in natural settings. To examine the potential influence of mussel filtration on suspended particulates, we measured the concentration of Escherichia coli, chlorophyll-a, and total suspended solids along a stream reach with a dense mussel assemblage (Mussel Site) and a stream reach with no [...]

A framework for modelling thermal load sensitivity across life

Pieter Arnold, Daniel W.A. Noble, Adrienne Nicotra, et al.

Published: 2025-06-01
Subjects: Ecology and Evolutionary Biology, Integrative Biology, Life Sciences, Physiology, Systems and Integrative Physiology Life Sciences

Forecasts of vulnerability to climate warming require an integrative understanding of how species are exposed to, are damaged by, and recover from thermal stress in natural environments. The sensitivity of species to temperature depends on the frequency, duration, and magnitude of thermal stress. Thus, there is a generally recognised need to move beyond physiological metrics based solely on [...]

Barriers and opportunities to preventing residential bird-window collisions

Anastasia Lysyk, Aalia I Khan, Deborah Conners, et al.

Published: 2025-05-31
Subjects: Biodiversity, Community-based Research, Ecology and Evolutionary Biology, Sociology

Collisions with windows are a leading source of avian mortality in North America. Window treatment options are commercially available; however, these solutions are rarely used. To investigate knowledge and perceptions of bird-window collisions, willingness to treat windows, and barriers and solutions to treating windows we conducted a survey of residents in Ottawa, Canada. Of 422 survey [...]

A systematic map of forest disturbance impacts on soil and litter fauna: knowledge gaps and a roadmap for future research

Philip Martin, Leticia Pérez-Izquierdo, Charlotte Biryol, et al.

Published: 2025-05-31
Subjects: Ecology and Evolutionary Biology, Other Ecology and Evolutionary Biology

Natural disturbances such as fires, droughts, windthrow, and pest outbreaks are increasing in frequency and severity, placing new pressures on forest ecosystems. Impacts on aboveground biodiversity are well understood, but effects on belowground communities - particularly soil and litter invertebrate fauna - remain understudied. Given the vast diversity of soil organisms, forest types, and [...]

Herbarium specimens reveal regional patterns of tallgrass prairie invasion and changing species abundance across 130 years

Matthew Austin, Andrew Kaul, Adam Smith, et al.

Published: 2025-05-28
Subjects: Biodiversity, Botany, Ecology and Evolutionary Biology, Life Sciences, Other Ecology and Evolutionary Biology, Plant Biology, Plant Sciences

The spread of non-native species is an acute threat to global biodiversity. However, a lack of long-term, spatially widespread occurrence data has prevented investigation of how multi-species invasions affect native assemblages. We harnessed more than 65,000 digitized herbarium specimens across 522 species to study how relative abundances of native and non-native species have changed since the [...]

Cellular Innovations and Diversity in the Lepidopteran Compound Eye

Wei Lu, Marcus R. Kronforst

Published: 2025-05-28
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Entomology, Evolution, Life Sciences, Molecular Genetics

Lepidoptera, having co-diversified with flowering plants and adapted to various diel niches, present a remarkable system for studying compound eye cell type diversity. Here we synthesize the latest research regarding lepidopteran eye evolution across different timescales, from species-level variation to family-level changes, and mechanistic levels, from broad anatomical variation to molecular [...]

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