Preprints
Filtering by Subject: Ecology and Evolutionary Biology
The promise of community-driven preprints in ecology and evolution
Published: 2024-06-13
Subjects: Ecology and Evolutionary Biology, Life Sciences
Publishing preprints is quickly becoming commonplace in ecology and evolutionary biology. Preprints can facilitate the rapid sharing of scientific knowledge establishing precedence and enabling feedback from the research community before peer review. Yet, significant barriers to preprint use exist including language barriers, a lack of understanding about the benefits of preprints and a lack of [...]
Making use of spatially biased variables in ecosystem condition accounting – a GIS based workflow
Published: 2024-06-06
Subjects: Ecology and Evolutionary Biology, Environmental Indicators and Impact Assessment, Environmental Monitoring
Ecosystem Condition Accounts (ECA) should reflect the integrity or quality of all nature inside the scope of the account, and therefore rely on spatially representative indicators for condition. All ECAs are subject to data constraints in some way. Therefore, being able to make use of spatially biased data sets would be very valuable. For national ECAs, modelling approaches can in some cases be [...]
Behavioral flexibility is similar in two closely related species where only one is rapidly expanding its geographic range
Published: 2024-06-06
Subjects: Behavior and Ethology, Biology, Comparative Psychology, Ecology and Evolutionary Biology, Life Sciences, Population Biology
Human modified environments are rapidly increasing, which puts other species in the precarious position of either adapting to a new area or, if they are not able to adapt, shifting their range to a more suitable environment. It is generally thought that behavioral flexibility, the ability to change behavior when circumstances change, plays an important role in the ability of a species to rapidly [...]
Tail-dependence of masting synchrony results in continent-wide seed scarcity
Published: 2024-06-06
Subjects: Ecology and Evolutionary Biology, Life Sciences
Spatial synchrony may be tail-dependent, meaning it is stronger for peaks rather than troughs, or vice versa. High interannual variation in seed production in perennial plants, called masting, can be synchronized at subcontinental scales, triggering extensive resource pulses or famines. We used data from 99 populations of European beech (\emph{Fagus sylvatica}) to examine whether masting [...]
IUCN Red List of Ecosystems, Mangroves of the Western Indian Ocean
Published: 2024-06-04
Subjects: Ecology and Evolutionary Biology, Life Sciences
‘Mangroves of the Western Indian Ocean’ is a regional ecosystem subgroup (level 4 unit of the IUCN Global Ecosystem Typology). This province spans 10 countries and includes the following marine ecoregions: Cargados Carajos/Tromelin Island, Delagoa, Mascarene Islands, Seychelles, Southeast Madagascar, East African Coral Coast, Northern Monsoon Current Coast, Bight of Sofala/Swamp [...]
Supporting study registration to reduce research waste
Published: 2024-06-04
Subjects: Ecology and Evolutionary Biology, Life Sciences, Medicine and Health Sciences, Psychology, Social and Behavioral Sciences
Research suffers from many inefficiencies. These lead to much research being avoidably wasted, with no or limited value to the end user (e.g. an estimated 82-89% of ecological research, and 85% of medical research). Here, we argue that the quality and impact of ecological research could be drastically improved by registration: pre-registration, and registered reports. However, without a [...]
Eco-evolutionary dynamics in grasslands during land use change: consequences for plant-microbe interactions and ecosystem function
Published: 2024-05-31
Subjects: Ecology and Evolutionary Biology, Life Sciences
1. Land use change can cause the loss of plant species and functional diversity, but whether it drives eco-evolutionary changes within plant species is unclear. 2. Semi-natural grasslands are particularly threatened by land use change, including management intensification on productive soils and abandonment on marginal land. As such, they serve as an excellent system for exploring if and how [...]
Evolutionary principles underpinning codon usage bias: patterns, functions, and mechanisms
Published: 2024-05-30
Subjects: Ecology and Evolutionary Biology
Synonymous codons are used unevenly despite coding for the same amino acid. Recent work has provided critical insights into the functions, mechanisms, and fitness consequences of codon usage bias and synonymous mutations. However, experiments aimed at understanding the role of synonymous mutations often involve only a small number of reporter genes. How do these observations generalize across [...]
The role of large language models in interdisciplinary research: opportunities, challenges, and ways forward
Published: 2024-05-27
Subjects: Ecology and Evolutionary Biology
1. Large language models (LLMs) are gaining importance in research as they offer many benefits. One often overlooked benefit is their potential to facilitate and support interdisciplinary research, which is key to addressing current global challenges, such as the twin crises of biodiversity loss and climate change. 2. LLMs can help reduce the [...]
Poor hypotheses and research waste in biology: learning from a theory crisis in psychology
Published: 2024-05-27
Subjects: Biology, Ecology and Evolutionary Biology, Life Sciences
While psychologists have extensively discussed a ‘theory crisis’, there has been no debate about such a crisis in biology. However, biologists, especially those working in the fields of ecology and evolution, have long discussed communication failures between theoreticians and empiricists. We argue such failure is one aspect of a theory crisis because misapplied and misunderstood [...]
Navigating phylogenetic conflict and evolutionary inference in plants with target capture data
Published: 2024-05-27
Subjects: Bioinformatics, Biology, Botany, Ecology and Evolutionary Biology, Evolution, Life Sciences, Plant Sciences, Research Methods in Life Sciences
Target capture has quickly become a preferred approach for plant systematic and evolutionary research, marking a step-change in the generation of data for phylogenetic inference. While this advancement has facilitated the resolution of many phylogenetic relationships, phylogenetic conflict continues to be reported, and often attributed to genome duplication, reticulation, deep coalescence or [...]
Multiple Disturbances, Multiple Legacies: Fire, Canopy Gaps, and Deer Jointly Change the Forest Seed Bank
Published: 2024-05-27
Subjects: Biodiversity, Ecology and Evolutionary Biology, Forest Sciences, Life Sciences, Plant Sciences
The manipulation of pre-colonial disturbances in U.S. forests can play a critical role in determining ecological composition, structure, and function. However, our understanding of how concurrent disturbances influence non-tree species is extremely limited in forests. To this end, we used a long-term, multi-disturbance experiment in an oak dominated forest in West Virginia, U.S.A. that [...]
Is the audience gender-blind? Smaller audience in female talks highlights prestige differences in academia
Published: 2024-05-27
Subjects: Ecology and Evolutionary Biology, Environmental Sciences, Evolution, Gender Equity in Education, Higher Education, Inequality and Stratification, Other Ecology and Evolutionary Biology, Psychological Phenomena and Processes
Although diverse perspectives are fundamental for fostering and advancing science, power relations have limited the development, propagation of ideas, and recognition of minority groups in academia. Gender bias is one of the most well-documented processes, leading women to drop out of their academic careers due to fewer opportunities and lower prestige. Using long-term data (2008-2019) on talks [...]
IUCN Red List of Ecosystems, Mangroves of the Central Pacific
Published: 2024-05-27
Subjects: Ecology and Evolutionary Biology, Life Sciences
The Central Pacific mangrove province is a regional ecosystem subgroup (level 4 unit of the IUCN Global Ecosystem Typology) including the marine ecoregions of the Gilbert/Ellis Islands, Marshall Islands, Phoenix/Tokelau/Northern Cook Islands, and Samoa Islands. The Central Pacific mangroves had a mapped extent in 2020 of 4.8 km2, representing less than 0.01% of the global mangrove area. The biota [...]
Behavioral flexibility is related to foraging, but not social or habitat use behaviors, in a species that is rapidly expanding its range
Published: 2024-05-24
Subjects: Biology, Ecology and Evolutionary Biology, Life Sciences, Psychology
The ability of other species to adapt to human modified environments is increasingly crucial because of the rapid expansion of this landscape type. Behavioral flexibility, the ability to change behavior in the face of a changing environment by packaging information and making it available to other cognitive processes, is hypothesized to be a key factor in a species’ ability to successfully adapt [...]