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Preprints

Filtering by Subject: Ecology and Evolutionary Biology

The bacterial immune system: identifying evolved defense adaptations

Ellinor Alseth, Sam P Brown

Published: 2026-05-13
Subjects: Ecology and Evolutionary Biology, Evolution, Microbiology

The last few years have witnessed a rapid expansion of reported bacterial defense mechanisms. Alongside established mechanisms of defense against molecular parasites (e.g. CRISPR-Cas, restriction-modification), hundreds of novel defenses are being described each year, contributing to an ever-expanding ‘bacterial immune system’. Terms like ‘defense’ and ‘immune’ are often used as shorthand for an [...]

Cold treatment benefits Mediterranean orchid seedlings cultivated in vitro

Gwenaëlle Deconninck, Argyrios Gerakis Gerakis, Victoria Chatzopoulou, et al.

Published: 2026-05-11
Subjects: Biology, Ecology and Evolutionary Biology, Life Sciences, Other Ecology and Evolutionary Biology, Plant Biology, Plant Sciences

1. Effective ex situ propagation is increasingly critical for the conservation and restoration of terrestrial orchids threatened by habitat loss, over-collection and climate change. However, large-scale propagation remains constrained by developmental bottlenecks during the transition from protocorms to established plantlets with storage organs. Cold exposure is often recommended to improve [...]

Hybridization in Animal Evolution

Kelsie Hunnicutt, Molly Schumer

Published: 2026-05-11
Subjects: Ecology and Evolutionary Biology, Life Sciences

In the past two decades, it has become clear that hybridization is so common in animal species as to be an almost universal feature of their evolutionary histories. Remnants of both ancient and contemporary hybridization events are present in the genomes of modern species, but their consequences are still not completely understood. In this review, we synthesize what is known about the [...]

Sexually antagonistic selection: a review of the theory and its implications

Ewan Flintham, Thomas Lesaffre, Sarah Otto, et al.

Published: 2026-05-08
Subjects: Ecology and Evolutionary Biology, Evolution, Population Biology

Sexually antagonistic selection arises when females and males have different fitness optima for traits with a shared genetic basis, so that the same alleles are favoured in one sex but disfavoured in the other. It has been implicated in a wide range of ecological and evolutionary processes, from the maintenance of a sex load to the evolution of sex chromosomes. Mathematical models have long been [...]

Optimizing sampling and monitoring of species interactions within Biodiversity Observation Networks

Gabriel Dansereau, Michael D. Catchen, Ceres Barros, et al.

Published: 2026-05-08
Subjects: Biodiversity, Ecology and Evolutionary Biology

Optimal monitoring strategies should be designed to efficiently monitor all essential facets of biodiversity. Yet, species interactions are often overlooked in monitoring designs compared to spatial coverage and species richness, partly due to the inherent difficulty of sampling and monitoring interactions compared to species distributions. Here, we used simulations to test the efficiency of [...]

Invasiveness reshapes the historical pattern of carp trait evolution

Garen Guzmán-Rendón, Joaquín Cárcamo, Cristián E. Hernández, et al.

Published: 2026-05-07
Subjects: Ecology and Evolutionary Biology, Life Sciences

Human-mediated invasions are increasingly recognised as contemporary ecological disturbances with profound impacts on microevolutionary processes. However, whether such impacts extend beyond microevolutionary change to alter long-term evolutionary trajectories across lineages remains poorly explored. Using a global phylogenetic analysis of nearly 1,400 carp species (freshwater fishes of the [...]

Identifying knowledge gaps on simultaneous above- and belowground organism responses to global change

Hendrik Mohr, Esme Ashe-Jepson, Malte Jochum

Published: 2026-05-07
Subjects: Ecology and Evolutionary Biology, Life Sciences, Terrestrial and Aquatic Ecology

Global change affects all terrestrial organisms regardless if they live above or below the ground. Even though they are strongly linked by various direct and indirect interactions, organisms can respond very differently to global change stressors, due to different features of above- and belowground compartments. Many different organism groups have shown declines in diversity, abundance or biomass [...]

Multi-scale surveillance reveals substantial egg-laying winter activity in Aedes albopictus mosquito populations across temperate Europe

Daniele Da Re, Giovanni Marini, Alessandro Albieri, et al.

Published: 2026-05-07
Subjects: Ecology and Evolutionary Biology, Entomology, Life Sciences

The Asian tiger mosquito (Aedes albopictus), a competent vector for dengue, chikungunya, and Zika viruses, has expanded rapidly across temperate Europe. European vector surveillance typically operates May to October, assuming winter diapause precludes activity and transmission risk. However, recent field observations suggest sustained egg-laying winter activity in southern European populations, [...]

Assessing the sensitivity and robustness of the Living Planet Index through simulated population dynamics: strengths, stability, and challenges

Cristian A. Cruz-Rodríguez, Gaëlle Mével, Janaína de Andrade Serrano, et al.

Published: 2026-05-07
Subjects: Animal Sciences, Biodiversity, Biology, Ecology and Evolutionary Biology, Forest Sciences, Life Sciences

Understanding population change through time is crucial for effective conservation of biodiversity. The Living Planet Index (LPI) is a key indicator for tracking global species abundance trends under the Kunming-Montreal Global Biodiversity Framework, offering a picture of population change over time. However, the sensitivity of the index to zero values or to the number of missing values in time [...]

The evolutionary link between food, condiments and medicine

Jamie B Thompson

Published: 2026-05-06
Subjects: Agricultural Science, Anthropology, Biodiversity, Biology, Botany, Ecology and Evolutionary Biology, Evolution, Food Science, Life Sciences, Plant Biology, Plant Sciences, Social and Behavioral Sciences

The deep relationship between humans and plants is of great interest to ethnobotanists, human ecologists, and evolutionary biologists. Humans have incorporated thousands of plant species into both traditional medicine and our diets, as foods and condiments. Many of these provide not only calories but also micronutrients and other bioactive compounds that contribute to health [1]. The boundaries [...]

Making survival spatial: an integrated model for territory occupancy and capture-recapture data

Jaume-Adria Badia-Boher, Michael Schaub, Mátyás Prommer, et al.

Published: 2026-05-05
Subjects: Biology, Ecology and Evolutionary Biology, Population Biology

Knowledge about spatial variation in survival is central to understanding population dynamics and guiding conservation, yet assessing it is very hard. This limitation arises because capture-mark-recapture (CMR) data required for such inference must be collected over large spatial extents, which is logistically demanding and seldom possible. By contrast, territory occupancy (TO) data are typically [...]

Does the substrate on which cryptogams grow matter for limno-terrestrial meiofauna?

Yelyzaveta Matsko, Bartłomiej Surmacz, Yevgen Kiosya, et al.

Published: 2026-05-04
Subjects: Biology, Ecology and Evolutionary Biology, Life Sciences, Other Ecology and Evolutionary Biology, Terrestrial and Aquatic Ecology

Cryptogam habitats support a wide range of limno-terrestrial meiofauna, but the factors that shape their communities are still not well understood. The physical substrate that cryptogams grow on (e.g., soil, the base of a tree, or its trunk) can influence local moisture, temperature, and nutrient conditions, yet its role in structuring meiofaunal assemblages has rarely been tested systematically. [...]

A Functionally Integrated Symbiotic System as a Mechanism for Angiosperm Diversification

Akira Yamawo

Published: 2026-05-02
Subjects: Biodiversity, Ecology and Evolutionary Biology, Forest Sciences, Plant Sciences, Systems Biology

Flowering plants have maintained exceptionally high diversity for over 100 million years, yet the mechanisms enabling sustained macroevolutionary diversification remain unresolved. Classical theory predicts a trade-off between speciation and extinction, but angiosperms have repeatedly diversified while persisting across heterogeneous environments. Mutualistic interactions, pollination, seed [...]

Global patterns of vulnerability to wildlife exploitation in tropical birds and mammals

Martin PHILIPPE-LESAFFRE, Iago Ferreiro-Arias, Ana Benítez-López¹

Published: 2026-05-01
Subjects: Ecology and Evolutionary Biology

Wildlife exploitation is one of the most pervasive anthropogenic pressures in tropical ecosystems and a major driver of vertebrate population declines, yet global assessments of species vulnerability to hunting remain spatially imprecise and methodologically inconsistent. We combine exposure to hunting with species-specific sensitivity and adaptive capacity to deliver a spatially explicit [...]

Sex differential effects of developmental heat stress on life-history and reproductive traits

Tuba Rizvi, Deep Sehgal, Klaus Reinhold

Published: 2026-05-01
Subjects: Behavior and Ethology, Biology, Ecology and Evolutionary Biology, Evolution, Life Sciences

Global warming has led to increased mean global temperatures with projections suggesting continued warming throughout this century, posing an escalating threat to biological systems worldwide. Ectotherms are most vulnerable to this change as heat stress conditions can have severe implications on their development, mating interactions, and fitness. However, the sex-specific effects of [...]

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