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Preprints

Filtering by Subject: Ecology and Evolutionary Biology

A data-driven assessment of the global community structure of pelagic zooplankton biomass

Corentin Clerc, Alexandre Schickele, Fabio Benedetti, et al.

Published: 2026-06-12
Subjects: Biodiversity, Ecology and Evolutionary Biology, Environmental Monitoring, Environmental Sciences, Marine Biology, Statistical Models

Aim: Zooplankton often dominate pelagic metazoan biomass, making them a central component of marine ecosystems and biogeochemical cycles. In this study, we aimed to: (1) provide biomass distributions of zooplankton functional types to support marine ecosystem monitoring and biogeochemical model evaluation; and (2) investigate regional and seasonal patterns of biomass across marine zooplankton [...]

Hunting in a tough neighborhood: juvenile octopus interactions with territorial and follower fish

Michaella Pereira Andrade, Jennifer Mather, Charles MD Santos

Published: 2026-06-12
Subjects: Ecology and Evolutionary Biology

Octopuses are keystone species in shallow-water marine ecosystems. Although researchers mostly focus on predator-prey interactions, many non-lethal yet non-neutral interactions occur, particularly among fish. These range from possible cooperation through kleptoparasitism and scavenging to occasional octopus predation on an unwary fish. We evaluated some of these interactions using video [...]

EntoScan and BEEomass: a standardized imaging system and a physically motivated model for high-throughput dry biomass estimation of arthropods

Melika Baghooee, Robert Thalheim, Fevziye Hasan, et al.

Published: 2026-06-12
Subjects: Biodiversity, Computational Biology, Computational Engineering, Ecology and Evolutionary Biology, Engineering, Entomology

Computer vision and AI are now widely used for automated insect classification, but their potential for estimating other traits, such as biomass, is not yet fully explored. Insect biomass is a key measure of ecosystem function, informing ecosystem services, food webs, and environmental change. It is also used to track population trends and estimate the contribution of insects to ecosystem carbon. [...]

Tree species richness effects on pre-dispersal seed predation are mediated by tree fruit type

FEILONG JI, Noga Abecassis-Monteyne, Xiaojuan Liu, et al.

Published: 2026-06-12
Subjects: Biodiversity, Ecology and Evolutionary Biology, Forest Sciences, Life Sciences

Forest BEF experiments are only now reaching a stage at which natural tree regeneration can be studied, offering new opportunities to understand how biodiversity shapes trophic interactions during early demographic filtering. Here, we quantified seed productivity and insect-mediated pre-dispersal seed predation on 12 tree species across a tree species richness gradient from 1 to 16 in the [...]

An integrated framework for unifying our understanding of nonconsumptive predation risk effects

Andrew Thomas Davidson, Tal Avgar, Daniel MacNulty, et al.

Published: 2026-06-12
Subjects: Behavior and Ethology, Biology, Ecology and Evolutionary Biology, Evolution, Integrative Biology, Life Sciences, Other Ecology and Evolutionary Biology, Population Biology, Terrestrial and Aquatic Ecology

Predation risk can induce risk-induced trait responses (RITRs) – changes in prey defensive traits including behavior, morphology, life history, and physiology – thought to have profound effects on prey fitness and population dynamics (termed ‘nonconsumptive effects’). Yet, predicting the magnitude of RITRs and their fitness consequences remains difficult because outcomes depend heavily on [...]

Evolutionary and operational trade-offs in assisted gene flow for climate-adaptive forestry

Camilla Stefanini, Jannis Bolzern, Katalin Csilléry

Published: 2026-06-11
Subjects: Ecology and Evolutionary Biology, Life Sciences

Assisted gene flow (AGF) is an adaptive forest management strategy to increase forests' resilience to climate change, yet little is known about how management decisions interact with the strength of natural selection and introgression dynamics that co-determine relative stand productivity. We used individual-based, spatially explicit simulations to investigate how spatial configuration (ranging [...]

Nest architecture as overlooked material culture: the case for systematic study of construction behaviour across nest-building primates

Andrea L. Permana

Published: 2026-06-10
Subjects: Animal Studies, Anthropology, Biological Psychology, Biology, Comparative Psychology, Ecology and Evolutionary Biology

Frans de Waal's work highlighted an uncomfortable question: not whether animals have complex cognitive lives, but why we are so reluctant to recognise them. Nest building in great apes is perhaps the most striking example of this problem. Every great ape builds a nest, every day, for the entirety of its adult life. The behaviour has been documented ecologically for decades. Yet the internal [...]

From Detections to Demography: Methodological Challenges and Opportunities in Survival Estimation from Automated Telemetry Networks

Scott Yanco, Clark Rushing, Bryant Dossman, et al.

Published: 2026-06-10
Subjects: Ecology and Evolutionary Biology

Survival is a fundamental demographic process influencing individual fitness and population dynamics. Automated telemetry systems offer unprecedented opportunities to estimate survival of highly mobile organisms across broad spatial and temporal scales. However, the structure of these tracking networks creates systematic biases that render standard survival models inadequate. Receiver stations [...]

Emergent competition resolves the paradox of stable microbial mutualisms

Oliver J Meacock, Sara Mitri

Published: 2026-06-10
Subjects: Ecology and Evolutionary Biology

What is the role of cooperation in determining ecosystem structure? This question is central to ecology, yet remains controversial; cooperative mechanisms such as plant-insect pollination and microbe-microbe cross-feeding are widespread, but ecological theory suggests that cooperative communities should be unstable. Here, we resolve this apparent contradiction by deriving a precise and general [...]

Predator Experience Shapes Behaviour: Comparing Stone Wētā (Hemideina maori) Populations With and Without Weka (Gallirallus australis hectori)

Sheri Johnson, Luke Thompson, Hamish Doogan, et al.

Published: 2026-06-10
Subjects: Biology, Ecology and Evolutionary Biology, Entomology, Life Sciences

Antipredator behaviour reflects both evolutionary history and individual experience, yet how populations respond to changes in predator exposure remains poorly understood, particularly for large invertebrates. We examined antipredator behaviour in two populations of stone wētā (Hemideina maori Pictet & Saussure, 1891) inhabiting weka-free Mou Tapu and nearby Mou Waho, where weka (Gallirallus [...]

Mapping microclimate temperatures in open ecosystems using UAVs: a comparison between thermal, correlative, and mechanistic approaches

Christophe Metsu, Sander Raets, Marijke Thoonen, et al.

Published: 2026-06-09
Subjects: Bioinformatics, Climate, Ecology and Evolutionary Biology, Environmental Engineering, Environmental Monitoring

Open terrestrial ecosystems exhibit pronounced fine scale thermal heterogeneity, yet spatially continuous microclimate data at biologically relevant heights and scales remain scarce. Here, we evaluate three unoccupied aerial vehicle (UAV) informed approaches for mapping microclimate temperatures, including land surface temperature (LST) and near surface air temperature (T13cm), in an open [...]

Intertidal Exposure Modulates Time-Integrated Heat Tolerance of the Eastern Oyster Crassostrea virginica

Andrew R Villeneuve, Brittany M Jellison, Easton R White

Published: 2026-06-08
Subjects: Ecology and Evolutionary Biology, Integrative Biology, Life Sciences, Marine Biology, Other Ecology and Evolutionary Biology

The rise of unprecedented heatwaves globally has caused an increase in mass mortality events, motivating the need for accurate predictions of population declines. Predicting organismal function under fluctuating thermal regimes is a central challenge in thermal biology, particularly in intertidal systems where organisms experience rapid shifts between submerged and aerial exposure. Here, we [...]

Modelling habitat selection using tracking data from central place foraging species: A practical guide for ecologists

Phil J. Bouchet, Ana Couto, Katherine F. Whyte, et al.

Published: 2026-06-04
Subjects: Applied Statistics, Behavior and Ethology, Biostatistics, Ecology and Evolutionary Biology, Natural Resources and Conservation, Other Ecology and Evolutionary Biology, Research Methods in Life Sciences, Statistical Methodology, Statistical Models

The study of habitat selection has long been at the heart of ecological research and is critical to deciphering the mechanisms that govern species’ responses to global change. This is particularly important for central place foraging species, whose ability to adapt to shifting environmental conditions and anthropogenic disturbance is limited by persistent attachment to a fixed site. Recent [...]

Problems of geometry, sampling, and scale in gridded biodiversity data, and proposed solutions

Petr Keil, Friederike Wölke, Gabriel Ortega-Solis, et al.

Published: 2026-06-03
Subjects: Ecology and Evolutionary Biology, Life Sciences

Grids, and gridded biodiversity data such as regional or country-level atlases, play a prominent role in ecology, particularly in the study of spatial patterns of species occupancy, geographic ranges, biodiversity, and their drivers and temporal dynamics. However, managing, exploring, and analyzing data in grids comes with problems. Here, we review the problems with gridded data, and the existing [...]

Computable Nature Dependency in a Watershed Knowledge Graph

Jayson Gutierrez, Javier C. Alvarez

Published: 2026-06-03
Subjects: Biodiversity, Ecology and Evolutionary Biology, Systems Biology

Resolving nature-related financial risk and watershed resilience requires a representational shift from opaque, aggregate indices to auditable, mechanistic pathways. Current natural-capital workflows often succumb to an "epistemic collapse", where granular ecological interactions are erased in favor of sector-level proxies or spatial heatmaps that lack a downstream asset trace. Here, we present a [...]

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