Preprints
Filtering by Subject: Ecology and Evolutionary Biology
Gut microbiome composition and function – including transposase gene abundance - varies with age, but not senescence, in a wild vertebrate
Published: 2024-11-14
Subjects: Bioinformatics, Ecology and Evolutionary Biology, Life Sciences, Microbiology, Ornithology
Studies on wild animals, mostly undertaken using 16S metabarcoding, have yielded ambigous evidence regarding changes in the gut microbiome (GM) with age and senescence. Furthermore, variation in GM function has rarely been studied in such wild populations, despite GM metabolic characteristics potentially being associated with host senescent declines. Here, we used seven years of longitudinal [...]
Advancing the spatiotemporal dimension of wildlife–pollution interactions
Published: 2024-11-14
Subjects: Animal Sciences, Behavior and Ethology, Biology, Ecology and Evolutionary Biology, Environmental Health Life Sciences, Life Sciences, Other Animal Sciences, Other Ecology and Evolutionary Biology, Other Pharmacology, Toxicology and Environmental Health, Pharmacology, Toxicology and Environmental Health, Toxicology, Zoology
Chemical pollution is a pervasive problem and is now considered the fastest-growing agent of global environmental change. Numerous pollutants are known to disrupt animal behaviour, alter ecological interactions, and shift evolutionary trajectories. Crucially, both chemical pollutants and individual organisms are non-randomly distributed throughout the environment. Despite this, the current [...]
Choosing friends in an uncertain world: information reduces relationship stability in a Bayesian learning model of cooperative partnership
Published: 2024-11-14
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Life Sciences
Social animals often form differentiated social relationships with conspecifics. Developing closer partnerships with some than others can facilitate cooperative interactions in which individuals share resources or risk. When choosing a partner, individuals face a decision: a known partner might be sub-optimal if better options are available, but switching partners can be risky if others' [...]
Pollinator ethanology: A comment on Bowland et al.
Published: 2024-11-13
Subjects: Animal Sciences, Behavior and Ethology, Biology, Ecology and Evolutionary Biology, Entomology, Evolution, Integrative Biology, Life Sciences, Nutrition, Pharmacology, Toxicology and Environmental Health, Toxicology, Zoology
An integrated approach to above- and below-ground ecological monitoring for nature-based solutions
Published: 2024-11-12
Subjects: Agricultural Science, Biodiversity, Ecology and Evolutionary Biology, Life Sciences
1. As the development of nature-based solutions (NbS) increases globally, it is important to ensure that projects meet the objective of benefiting biodiversity, alongside tackling societal challenges. However, most NbS projects do not directly monitor ecological outcomes, and those that do often focus on a limited set of metrics. It is therefore challenging to assess whether projects fulfil the [...]
Frequency-dependence favors social plasticity and facilitates socio-eco-evolutionary feedback in fluctuating environments
Published: 2024-11-12
Subjects: Ecology and Evolutionary Biology, Integrative Biology
1. Increasing attention is being devoted to the study of phenotypic plasticity in social environments. However, much remains unknown about the selection pressures driving the evolution of social plasticity, as well as the pathways by which social plasticity may facilitate or constrain feedback between ecological and evolutionary dynamics. Here we explore these questions using quantitative genetic [...]
Population genetics of rainforest mountain frogs (Anura: Limnodynastidae: Philoria) severely impacted by the Australian megafires
Published: 2024-11-11
Subjects: Ecology and Evolutionary Biology
The 2019/20 Australian megafires impacted numerous species, including six of the seven montane frog species in the genus Philoria, which are confined to isolated rainforest habitats across high-altitude areas in eastern Australian Gondwonan rainforest. Using single nucleotide polymorphisms, we examined the genetic structure and diversity of the six northern Philoria species to inform conservation [...]
Conformal Prediction quantifies the uncertainty of Species Distribution Models
Published: 2024-11-11
Subjects: Ecology and Evolutionary Biology, Life Sciences
Providing accurate estimates of uncertainty is key for the analysis, adoption, and interpretation of species distribution models. In this manuscript, through the analysis of data from an emblematic North American cryptid, I illustrate how Conformal Prediction allows fast and informative uncertainty quantification. I discuss how the conformal predictions can be used to gain more knowledge about [...]
Reliability of meta-analyses in ecology and evolution: (mostly) good news from a case study on sexual signals
Published: 2024-11-09
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Evolution
Meta-analyses are powerful synthesis tools that are popular in ecology and evolution owing to the rapidly growing literature of this field. Although the usefulness of meta-analyses depends on their reliability, such as the precision of individual and mean effect sizes, attempts to reproduce meta-analyses’ results remain rare in ecology and evolution. Here, we assess the reliability of 41 [...]
Evolutionarily Optimal Phage Life-History Traits
Published: 2024-11-09
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences, Microbiology, Population Biology
Optimal phage life-history traits are computed from data on phenotypic tradeoffs presented in De Paepe and Tadei (2006). A parameter is introduced, l_e, that describes the loss of virions in the environment. Hygienic interventions increase l_e. The optimal burst size decreases with l_e and the optimal capsid thickness increases with l_e. The optimal viral fitness also decreases with l_e. An [...]
IUCN Red List of Ecosystems, Mangroves of the Tropical Southwestern Atlantic
Published: 2024-11-08
Subjects: Ecology and Evolutionary Biology, Life Sciences
The “Mangroves of the Tropical Southwestern Atlantic” (TSA) is a regional ecosystem subgroup (level 4 unit of the IUCN Global Ecosystem Typology). It includes the marine ecoregions of Eastern Brazil, Northeastern Brazil, including the Fernando de Noronha Archipelago and Rocas Atoll. The TSA mangroves had a mapped extent of 1719.7 km2 in 2020, representing 1.2% of the global mangrove area. The [...]
Earlier and increased growth of tundra willows after a decade of growth in a warmer common garden environment
Published: 2024-11-08
Subjects: Biology, Botany, Ecology and Evolutionary Biology, Life Sciences, Plant Biology, Plant Sciences, Terrestrial and Aquatic Ecology
1. The expansion of woody shrubs, known as shrubification, is one of the most widely observed patterns of vegetation change in the tundra. Yet, we do not know the relative importance of plant plasticity and genetic change in determining shrub responses to warming. Plastic responses to the environment can be rapid, while genetic differentiation is much slower. 2. We established a common garden [...]
Altered phenotypic responses of asexual Arctic Daphnia after 10 years of rapid climate change
Published: 2024-11-05
Subjects: Comparative and Evolutionary Physiology, Ecology and Evolutionary Biology, Genetics and Genomics, Life Sciences, Terrestrial and Aquatic Ecology
Understanding the fates of organisms and ecosystems under global change requires consideration of the organisms’ rapid adaptation potential. In the Arctic, the recent temperature increase strongly impacts freshwater ecosystems which are important sentinels for climate change. However, a mechanistic understanding on the adaptive capacity of their key zooplankton grazers, among them polyploid, [...]
Beyond the concrete jungle: The value of urban biodiversity for regional conservation efforts
Published: 2024-11-04
Subjects: Biodiversity, Ecology and Evolutionary Biology
Urbanization deletes and degrades natural ecosystems, contributing to the ongoing biodiversity crisis. Yet, on the local scale, well-managed cities can host significant biodiversity, including endemic and threatened species. Understanding the trade-off between local and regional biodiversity outcomes is limited, primarily due to the lack of comprehensive sampling across heterogeneous urban areas [...]
Niche dynamics of alien plant species in Mediterranean Europe
Published: 2024-11-03
Subjects: Biology, Ecology and Evolutionary Biology, Life Sciences, Plant Sciences
Aim Humans have spread plants globally for millennia, inadvertently causing ecological disruptions. However, biological invasions also provide a unique opportunity to study the process of niche dynamics, through which species adapt their niche when confronted with novel environments. Focusing on the Mediterranean Basin, we assessed 1) which traits favour niche dynamics, and 2) whether niche [...]