Preprints
Filtering by Subject: Life Sciences
What do functional diversity, redundancy, rarity, and originality actually measure? A theoretical guide for ecologists and conservationists
Published: 2024-08-02
Subjects: Life Sciences
Functional diversity, redundancy, rarity, and originality are fundamental concepts in ecology and conservation biology. Despite their frequent use, the precise meaning and relationships between these measures are often unclear. This paper aims to provide a comprehensive theoretical framework to elucidate what each of these measures captures and how they interrelate. By integrating traditional [...]
Assembly Graph as the Rosetta Stone of Ecological Assembly
Published: 2024-08-02
Subjects: Ecology and Evolutionary Biology, Life Sciences
Ecological assembly---the process of ecological community formation through species introductions---has recently seen exciting theoretical advancements across dynamical, informational, and probabilistic approaches. However, these theories often remain inaccessible to non-theoreticians, and they lack a unifying lens. Here, I introduce the assembly graph as an integrative tool to connect [...]
Evolutionary rescue by aneuploidy in tumors exposed to anti-cancer drugs
Published: 2024-07-31
Subjects: Ecology and Evolutionary Biology, Evolution, Genetics, Life Sciences
Evolutionary rescue happens when a population survives a sudden environmental change that initially causes the population to decline toward extinction. A prime example of evolutionary rescue is the ability of cancer to survive exposure to treatment. One evolutionary mechanism by which a population of cancer cells can adapt to chemotherapy is aneuploidy. Aneuploid cancer cells can be fitter in an [...]
The Conguillío Statement on the values and responsibilities of ecologists
Published: 2024-07-31
Subjects: Life Sciences
Amid global environmental crises threatening the survival of many species, including our own, a diverse group of scientists from 15 countries and members of 16 professional and academic societies, concerned with the current global environmental crisis met in February 2024 to address the urgent need to reflect on, and identify, our core values and responsibilities as individual professionals and [...]
Ongoing collapse of avifauna in temperate oceanic islands close to the mainland in the Anthropocene
Published: 2024-07-30
Subjects: Animal Sciences, Biodiversity, Ecology and Evolutionary Biology, Life Sciences
1. Oceanic island ecosystems are highly vulnerable to human activity. Furthermore, oceanic islands close to the mainland provide distinct perspectives on natural processes, including overseas dispersal from the mainland. However, the effects of overseas dispersal and human activity on insular community changes have not been empirically demonstrated. 2. To clarify the mechanisms driving changes in [...]
EcoState: Extending Ecopath with Ecosim to estimate biological parameters and process errors using RTMB and time-series data
Published: 2024-07-30
Subjects: Life Sciences
Mass-balance ecosystem models including Ecopath with Ecosim (EwE) are widely used tools for analyzing aquatic ecosystems to support strategic ecosystem-based management. These models are typically developed by first tuning unknown parameters to achieve mass balance (termed “Ecopath”), then projecting dynamics over time (“Ecosim”) while sometimes tuning predator-prey vulnerability parameters to [...]
A review of professional ecological societies’ values, missions, and ethics
Published: 2024-07-27
Subjects: Ecology and Evolutionary Biology, Life Sciences
The rapid decline in Earth’s biodiversity poses significant threats to nature and human well-being. Human activities such as land use change, pollution, climate change, invasive species, and overexploitation drive this crisis, endangering millions of species and affecting critical habitats and ecosystems. This study investigates the role of professional ecological societies in addressing the [...]
Age, sex, and temperature shape within- and among-individual space use in black-capped chickadees
Published: 2024-07-27
Subjects: Animal Studies, Behavior and Ethology, Life Sciences, Social and Behavioral Sciences
Historically, spatial ecology studies have focused on average movement patterns within animal groups; however, recent studies highlight the value of considering movement decisions both within- and among-individuals. Using a marked population of black-capped chickadees (Poecile atricapillus), we used the number of unique feeders an individual visits within our study area as a proxy for space use [...]
Sexual dimorphism of metabolism in vampire crabs (Geosesarma hagen) is temperature and size-dependent
Published: 2024-07-27
Subjects: Ecology and Evolutionary Biology, Integrative Biology, Life Sciences, Physiology
El metabolismo es un vínculo clave entre la fisiología de un organismo y el medio ambiente. La plasticidad en las tasas metabólicas permite a los organismos responder y adaptarse al cambio ambiental. Comprender cómo cambia el metabolismo en respuesta a los aumentos de la temperatura ambiente y cómo estos cambios tendrán efectos diferenciales entre los individuos es un objetivo fundamental. [...]
IUCN Red List of Ecosystems, Mangroves of The Agulhas
Published: 2024-07-26
Subjects: Ecology and Evolutionary Biology, Life Sciences
Mangroves of the Agulhas is a regional ecosystem subgroup (Level 4 unit of the IUCN Global Ecosystem Typology). It includes the marine ecoregions of Agulhas Bank and KwaZulu-Natal that extend along the South African eastern coastline. The extent of the Agulhas mangroves in 2023 is 23.0 km2, representing 0.02% of the global mangrove area. Mangroves in this province are limited to 31 estuaries [...]
Snakes (Erythrolamprus spp.) with a complex toxic diet show convergent yet highly heterogeneous voltage-gated sodium channel evolution
Published: 2024-07-25
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences, Other Ecology and Evolutionary Biology, Population Biology
Chemical defenses shape ecosystems by orchestrating interactions between species and promoting specialization on toxic prey. Many toxins exist in highly biodiverse tropical ecosystems, sometimes in the same prey, imposing challenges for studying toxin resistance and requiring the development of new models. Royal ground snakes (Erythrolamprus) play a significant but understudied role as predators [...]
Short-sighted evolution of virulence for invasive gut microbes: from hypothesis to tests.
Published: 2024-07-25
Subjects: Life Sciences, Medicine and Health Sciences
Why microbes harm their hosts is a fundamental question in evolutionary biology with broad relevance to our understanding of infectious diseases. Several hypotheses have been proposed to explain this "evolution of virulence." In this perspective, we re-examine one of these hypotheses in the specific context of the human gut microbiome, namely short-sighted evolution. According to the [...]
Match or mismatch: Tokay geckos adjust their behaviour to familiar and unfamiliar handlers but according to the context
Published: 2024-07-25
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Life Sciences
Animals need to distinguish among different con- and heterospecific individuals to be able to adjust behaviour appropriately. Behavioural responses towards familiar individuals might vary based on context in which they are encountered. However, such context dependent responses, while beneficial in the wild, can impact experimental results, increase error, decrease reproducibility and threaten [...]
Does biogeographic history shape spatial patterns of intraspecific variation in personality, performance and morphology?
Published: 2024-07-25
Subjects: Life Sciences
Addressing how individual variation within populations drives the evolution of biodiversity patterns is a major challenge in ecology and evolutionary biology. Historical biogeographic processes have had dramatic consequences on the structure of biodiversity. However, while the interplay between historical processes and genotypic diversity within populations has been widely investigated, the [...]
Deciphering probabilistic species interaction networks
Published: 2024-07-24
Subjects: Ecology and Evolutionary Biology, Life Sciences, Other Ecology and Evolutionary Biology
Representing species interactions probabilistically (how likely are they to occur?) as opposed to deterministically (are they occurring?) conveys uncertainties in our knowledge of interactions and information on their variability. The sources of uncertainty captured by interaction probabilities depend on the method used to evaluate them: uncertainty of predictive models, subjective assessment of [...]