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Preprints

Filtering by Subject: Life Sciences

Borealization of tundra ecosystems with climate and land-use change

Mariana Verdonen, Isabel C Barrio, Laura Barbero-Palacios, et al.

Published: 2025-05-23
Subjects: Life Sciences

As the colder regions of the planet warm, species are moving northward and upward from the boreal forest to the tundra biome, a process that has been referred to as borealization. Here, we examine the diverse uses of the term borealization and propose the concept of tundra borealization for terrestrial environments to specifically describe shifts in species composition from boreal to tundra [...]

Decoding Genomic Landscapes of Introgression

Xin Huang, Josef Hackl, Martin Kuhlwilm

Published: 2025-05-23
Subjects: Life Sciences

Genomic landscapes of introgression provide valuable information for how different evolutionary processes interact and leave signatures in genomes. The recent expansion of genomic datasets across diverse taxa, together with advances in methodological development, has created new opportunities to investigate the impact of introgression along individual genomes in various clades, making the precise [...]

Neighborhood habitat gains increase plant species richness in forest fragments

Kyle Rosenblad, Jon Sullivan

Published: 2025-05-23
Subjects: Life Sciences

Theory and indirect evidence suggest that when new habitat is added to a habitat fragment’s local landscape, or “neighborhood”, species richness in the fragment will increase. Although this hypothesis is frequently assumed, it has not yet been tested directly with longitudinal data. In a natural forest regeneration experiment on Aotearoa New Zealand’s South Island, we use causal inference to show [...]

Ocean warming drives abrupt declines in fish productivity at global scale

Mathieu Pélissié, Vincent Devictor, Olaf Jensen, et al.

Published: 2025-05-22
Subjects: Life Sciences

Marine life is under multiple pressures, including climate change and overfishing. Environmental change and variability can threaten fishery sustainability, especially when it results in large, abrupt and persistent shifts in productivity of fish stocks. Reports of abrupt shifts in marine systems are not uncommon, but a global assessment of their occurrence and drivers is seriously lacking. Here, [...]

IUCN Red List of Ecosystems. Sandy Beaches & Dunes of the Gulf of Guinea North

Kwasi Appeaning Addo, Selasi Y. Avornyo, Philip-Neri Jayson-Quashigah, et al.

Published: 2025-05-22
Subjects: Life Sciences

The sandy beaches and dunes of the Gulf of Guinea North is a regional ecosystem subgroup along the West African coast. It had a mapped extent of 256 km² in 2022, with a width ranging from of 0.01 km to 1.02 km, and stretches over approximately 2481 km. This ecosystem subgroup extends along the shores of Benin, Togo, Ghana, Côte d'Ivoire, Liberia, Sierra Leone, Guinea and Guinea Bissau. This [...]

IUCN Red List of Ecosystems. Sandy Beaches & Dunes of the West African Transition

Kwasi Appeaning Addo, Philip-Neri Jayson-Quashigah, Selasi Y. Avornyo, et al.

Published: 2025-05-22
Subjects: Biology, Ecology and Evolutionary Biology, Life Sciences

Abstract The ‘Sandy Beaches and Dunes of the West African Transition’ form a regional ecosystem subgroup along the West African coast. It had a mapped extent of 584 km² in 2022, with a width ranging from 0.012 km to 4.796 km, and stretching over approximately 1321 km. This ecosystem subgroup extends along the shores of Mauritania, The Gambia and Senegal. This ecosystem frequently experiences [...]

Revisiting the copepod diversity of Indian Sundarbans through estimation of carcasses

Debarati Sengupta, Danilo Calliari, Sourav Paul

Published: 2025-05-21
Subjects: Life Sciences

Diversity assessment of plankton traditionally considers species richness and abundance, overlooking the vital state of individuals (i.e., alive or dead). This study aimed to integrate the vital state of zooplankters into diversity indices, using the copepods of the Indian Sundarbans (IS) as an example community. It was hypothesized that when carcasses estimation (CE) is incorporated diversity [...]

Filling Monitoring Gaps for Data-deficient Species Using Annual Occupancy Predictions from Co-occurrence Models

Hyun Yong Chung, Dae Kyung Lee, John Losey

Published: 2025-05-21
Subjects: Biodiversity, Ecology and Evolutionary Biology, Entomology, Life Sciences

Fragmented surveys and limited monitoring exclude most invertebrate species from conservation policy. We present a framework that generates annual occupancy predictions using species distribution models (SDMs) to reconstruct missing trends—not to extrapolate trends, but to fill them in (the fill-in approach). Instead of filtering poor-data regions and years or relying on static environmental [...]

NextGeneration specimen digitization: The international herbarium community goes spectral!

Jeannine Cavender-Bares, Dawson M White, Natalie Iwanycki Ahlstrand, et al.

Published: 2025-05-20
Subjects: Life Sciences

1. Spectral reflectance measured from herbarium specimens represents a vast source of plant phenotypic and functional trait data. 2. The potential to capture data from specimens to enhance knowledge of plant function and taxon identification has inspired many laboratories worldwide to initiate next-generation spectral digitization from specimens. 3. Combining these datasets into a coordinated [...]

Multimodal data integration to model, predict, and understand changes in plant biodiversity: a systematic review

Emilce Soledad Matinez, Eva Luz Tejada-Gutiérrez, Albert Sorribas, et al.

Published: 2025-05-16
Subjects: Life Sciences

The integration of multimodal data to analyze, model, and predict changes in plant biodiversity is critical for addressing global conservation challenges. This systematic review examines the current landscape of plant biodiversity data, focusing on the identification, classification, and evaluation of key open-access data sources and integration methodologies. We highlight the strengths and [...]

Nestbox use is linked to increased paternity loss in infected blue tits, but not great tits

Irene Di Lecce, Joanna Sudyka, Marta Szulkin, et al.

Published: 2025-05-16
Subjects: Life Sciences

Host-parasite interactions and reproductive strategies are critical aspects of avian life history, yet knowledge of their interplay in the context of nesting site microhabitat, in particular between natural and artificial nesting sites, is lacking. The choice of nesting site is critical for successful breeding, by ensuring protection from predators and a suitable environment for incubation and [...]

Disordered and Partially Structured Models in Community Ecology: What are they? And how do we use them?

Mathew Leibold, Matthieu Barbier

Published: 2025-05-15
Subjects: Life Sciences, Physical Sciences and Mathematics

Community ecology describes how species interact with each other and with their environment. In nature, processes can be very complex because they involve hundreds to thousands of species interacting with each other in complex environmental landscapes. Classical approaches that have provided key insights have largely focused on the study of tractable subsets of species and patches, but these do [...]

The burden of a failed error culture in biologging

Brendan James Barrett, Wolfgang Fielder, Francesca Frisoni, et al.

Published: 2025-05-14
Subjects: Ecology and Evolutionary Biology, Life Sciences

Driven by technological advancements and reduced costs, biologging has seen a rapid growth transforming the study of animal behaviour and ecology. This ``golden era'' of animal tracking provides unprecedented insights into wildlife, aiding conservation efforts and ecological research. However, in the wake of the rapid growth loom pressing ethical and methodological challenges, including a lack of [...]

Transgenerational plasticity to warming decreases nutrient release by a keystone grazer

Sarah Hasnain, Valerie McCarthy, Cihelio Alves Amorim, et al.

Published: 2025-05-14
Subjects: Life Sciences

Increasing temperatures as a result of global climate change can alter the physiology of organisms via selection for tolerant genotypes and individual-level plasticity. Organisms experiencing thermal stress can not only modify their own physiological expression, but also those of future generations; i.e. transgenerational plasticity (TGP). While warming triggered TGP is well documented, its [...]

Invisible but Identifiable: p-Chips as a Reliable Marking Method for Amazonian Bats

Juan Jesus Pellón, Naija Cuzmar, Jorge Luis Mendoza, et al.

Published: 2025-05-13
Subjects: Life Sciences

Marking techniques are essential for studying bat ecology and informing conservation efforts, yet many existing methods present challenges related to size, tag detectability, and long-term retention. P-Chips, ultra-miniaturized transponders detectable via red laser light, offer a promising alternative to traditional banding or passive integrated transponer (PIT) tags. While their use has been [...]

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