Preprints
There are 2377 Preprints listed.
Do environmental fluctuations during development affect trait variation? An experimental test with salinity
Published: 2024-09-21
Subjects: Life Sciences
Climate change is a driver of extinction, with extreme events occurring more frequently. It increases both the amount and variability in environmental stress that organisms experience. In novel environments, greater intra-specific trait variation increases the opportunity for natural selection as individuals with fortuitously advantageous trait expression may thrive. Many studies focus on changes [...]
Wild vs. domestic ungulate ecosystem impacts: understanding functional differences requires greater focus on mechanisms
Published: 2024-09-21
Subjects: Biodiversity, Biology, Ecology and Evolutionary Biology
Ungulates play vital roles in ecological systems, shaping plant biomass and diversity via herbivory and impacting soil properties through trampling and nutrient deposition. As ungulate communities fluctuate across the globe, the extent to which wild ungulates and domestic livestock can play similar ecological roles is an increasingly vital - and fraught - question. Here, we synthesized the [...]
Developing Machine Learning Applications for Population Genetic Inference: Ensuring Precise Terminology and Robust Implementation
Published: 2024-09-20
Subjects: Life Sciences
Machine learning applications for population genetic inference are emerging due to their potential to leverage large-scale genomic datasets, offering insights that traditional statistical methods may overlook. However, I have identified certain recurring issues. First, there is sometimes confusion between power and recall, and between the false discovery rate and one minus precision. These terms [...]
Creating a Dataset for the Detection of Flying Birds
Published: 2024-09-20
Subjects: Artificial Intelligence and Robotics, Ornithology
We present a pipeline for collecting a dataset for the detection of flying birds in videos. We treat the creation of a dataset as an iterative task, which allows to train an inference system periodically, and to improve gradually its performance. We follow a three stage pipeline, that includes repetitive video recording, video annotation and frame sampling for training a Deep Learning detector. [...]
Reassessing a Holocene extinction: multiple lines of evidence do not support the historical presence and recent extirpation of a protected anole on the island of Anguilla
Published: 2024-09-20
Subjects: Biodiversity, Genomics, Integrative Biology, Other Ecology and Evolutionary Biology, Zoology
Accurate assessment of historical species ranges is important for conservation science and management. Inaccurate historical species ranges can lead to incorrect assumptions about local extinctions, population trends, and potential sites for reintroductions. Yet, historical knowledge is often lacking for many species. Here, we examine the case of the bearded anole, Anolis pogus, which is long [...]
Making sense of the virome in light of evolution and ecology
Published: 2024-09-20
Subjects: Life Sciences
Understanding the patterns and drivers of viral prevalence and abundance is of key importance for understanding pathogen emergence. Over the last decade, metagenomic sequencing has exponentially expanded our knowledge of the diversity and evolution of viruses associated with all domains of life. However, as most of these ‘virome’ studies are primarily descriptive, our understanding of the [...]
Spatial connectivity through mountains and deserts drove South American scorpion's dispersal
Published: 2024-09-20
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
We inferred the geographic dispersal routes and the environmental conditions that shaped the ~30-million-years historical biogeography of Brachistosternus scorpions in South America. We evaluated the role that altitude and aridity had on the geographic distance that each species dispersed from the location of the genus common ancestor. Based on previous studies, we evaluated the hypothesis [...]
Demographic expansion and panmixia in a St. Martin endemic, Anolis pogus, coincides with the decline of a competitor
Published: 2024-09-19
Subjects: Biodiversity, Ecology and Evolutionary Biology, Evolution, Genomics, Population Biology, Zoology
Understanding patterns of differentiation at microgeographic scales can enhance our understanding of evolutionary dynamics and lead to the development of effective conservation strategies. In particular, high levels of landscape heterogeneity can strongly influence species abundances, genetic structure, and demographic trends. The bearded anole, Anolis pogus, is endemic to the topographically [...]
Does heat tolerance vary with rates of oxygen production in photosymbiotic cnidarians?
Published: 2024-09-19
Subjects: Life Sciences
Oxygen acquisition and delivery to tissues is believed to be a key factor in heat tolerance, but testing this link has been challenging due to methodological limitations in separating processes related to oxygen acquisition and oxygen delivery. In this study, we altered tissue oxygenation by manipulating light intensity using cnidarians that host endosymbiotic algae as a model. We first verified [...]
Growth decline in European beech associated with temperature-driven increase in reproductive allocation
Published: 2024-09-18
Subjects: Life Sciences
Climate change is impacting forests in complex ways, with indirect effects arising from interactions between tree growth and reproduction often overlooked. Our 43-year study of European beech (Fagus sylvatica), showed that rising summer temperatures since 2005 have led to more frequent seed production events. This shift increases reproductive effort but depletes the trees' stored resources due to [...]
An introduction to generative network models and how they may be used to study animal sociality
Published: 2024-09-18
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Physical Sciences and Mathematics, Social and Behavioral Sciences
Social networks constitute an important approach in the study of animal social behaviour. So far, focus has been on statistical analysis of animal social network structures. However, social networks can also be studied by generative network models - procedures that create simulated network structures. These models play a key role in wider network science, but despite occasional use, have not yet [...]
Intraspecific competition along different life stages can stabilize coexistence among dragonflies and damselflies
Published: 2024-09-18
Subjects: Life Sciences
Biodiversity is sustained by stabilizing mechanisms of coexistence that inhibit species of competitive exclusion. Yet, in organisms with complex life cycles competitive dynamics may vary according to the life stage. Dragonflies are optimal organisms to test these ideas, as aquatic larvae are generalists in their feeding behavior, but adults have a wide variety of sexual behaviors. In this way, we [...]
Widespread decline of ground beetles in Germany
Published: 2024-09-18
Subjects: Biodiversity, Life Sciences
Many insect species are facing existential crises, primarily due to diverse human-induced activities. Most insect assessments, however, are based on short-term data or some iconic species. Here, in close collaboration with taxonomic experts from natural history societies, we compiled the best available occurrence data for ground beetles in Germany, estimated the changes in species occupancy over [...]
How might turbulence affect animal flight in a changing world?
Published: 2024-09-18
Subjects: Life Sciences
Scaling in Nervous Systems
Published: 2024-09-13
Subjects: Life Sciences