Preprints
There are 2302 Preprints listed.
Dragon Kill Points: applying a transparent working template to relieve authorship stress
Published: 2025-03-20
Subjects: Arts and Humanities, Business, Education, Engineering, Law, Life Sciences, Medicine and Health Sciences, Physical Sciences and Mathematics, Social and Behavioral Sciences
The concept of authorship, while straightforward in theory, proves to be remarkably complex in practice. While existing frameworks provide a foundation for classifying and ranking authorship roles, conflicts still arise when contributions are ambiguous or poorly documented. To address these issues, we propose Dragon Kill Points, adapted from multiplayer gaming, which tracks individual [...]
Recovery of forest structural complexity during secondary succession in the tropics
Published: 2025-03-19
Subjects: Agricultural Science, Forest Sciences, Life Sciences, Plant Sciences, Terrestrial and Aquatic Ecology
Forest structural complexity is an essential determinant of forest ecosystem functions and biodiversity. The natural dynamics of structural complexity of tropical forests remain largely unexplored, especially for naturally regenerating forest during secondary succession. Better understanding the trajectories of forest structural complexity recovery is crucial to inform the development of forest [...]
Social Learning and Culture in Birds: Emerging Patterns and Relevance to Conservation
Published: 2025-03-19
Subjects: Ecology and Evolutionary Biology
There is now abundant evidence for a role of social learning and culture in shaping behaviour in a range of avian species across multiple contexts, from migration routes in geese and foraging behaviour in crows, to passerine song. Recent emerging evidence has further linked culture to fitness outcomes in some birds, highlighting its potential importance for conservation. Here, we first summarise [...]
Viability selection on coat spot patterns correlates with temperature anomalies in Masai giraffes
Published: 2025-03-19
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences, Other Ecology and Evolutionary Biology, Population Biology
Remarkable variation in animal colour patterns is often shaped by heterogeneous selection, reflecting adaptation to variable environmental conditions. However, the adaptive functions of patterns and drivers of selection remain poorly understood. Shape and size of colour patterns may help with thermoregulation and thus be altered by temperature anomalies, which are predicted to be more frequent [...]
The decades-long recovery of nocturnal bees in logged forests is counteracted by broad resource range and reliance on pioneers
Published: 2025-03-18
Subjects: Life Sciences
Nocturnal bees are elusive pollinators for which little and fragmented evidence of their dietary breadth is available. Moreover, despite their assumed relevance as pollinators of tropical plants, there is no information on how nocturnal bees respond to the loss of suitable habitats and forest succession. Here, we investigated the recovery of Megalopta bees, a prominent group of nocturnal [...]
Citizen science data supports sexual dichromatism but rejects thermal melanism in the European fire salamander (Salamandra salamandra)
Published: 2025-03-18
Subjects: Ecology and Evolutionary Biology
Background Conspicuous color patterns are traditionally believed to advertise the toxicity of prey to potential predators. However, many aposematic species show drastic variation in coloration, indicating the possibility of other functions of coloration. To study these other functions, we can investigate the influence of inherent (e.g., sex) and external factors (e.g., climate) on color [...]
COI metabarcoding with a curated reference database and optimized protocol provides a reliable species-level diversity assessment of tardigrades
Published: 2025-03-18
Subjects: Zoology
DNA metabarcoding is revolutionizing biodiversity research by providing rapid and efficient ways of collecting species occurrence data. However, it has not yet been effectively applied to many taxonomic groups, mainly due to a significant lack of reference sequences and dedicated protocols. One such group is the tardigrades - a charismatic phylum of microinvertebrates known for their [...]
Predicting interaction frequency in plant-pollinator networks
Published: 2025-03-17
Subjects: Biodiversity, Ecology and Evolutionary Biology, Life Sciences, Other Ecology and Evolutionary Biology
Flowers and their pollinators represent a bipartite interaction system, whose links are hypothesised to be related to species traits. To explore whether we can predict the weight of this link, i.e. the frequency of interactions, in an validation network, we analysed 14 studies of pollinator-flower visitation network from around the world. We used information on species abundances, their traits [...]
Conservation macrogenetics reveals the potential hidden consequences of the 2019-2020 Black Summer fires on Australian biodiversity
Published: 2025-03-17
Subjects: Biodiversity, Genetics, Genomics, Life Sciences, Molecular Genetics, Other Ecology and Evolutionary Biology, Population Biology
The use of genetic analyses has become ubiquitous in conservation planning and management as biodiversity is increasingly threatened globally. Typically, such analyses are employed at the species-level, though as genetic data accrue, it is now possible to consider the genetic composition of multiple species across landscapes. Such macrogenetic perspectives can reveal the potential genetic [...]
On the Repeated Evolution of Parthenogenesis in Stick Insects
Published: 2025-03-17
Subjects: Life Sciences
A striking aspect of the biology of stick insects is the widespread occurrence of parthenogenesis, including rare, spontaneous events in sexual species, facultative parthenogenesis as well as obligately parthenogenetic species. This review synthesizes current knowledge on the origins, mechanisms, and evolutionary consequences of parthenogenesis in stick insects, with a particular focus on its [...]
Model-based ordination for phenological studies: from controlling sampling bias to inferring temporal associations
Published: 2025-03-17
Subjects: Biostatistics, Ecology and Evolutionary Biology, Integrative Biology, Longitudinal Data Analysis and Time Series, Multivariate Analysis, Statistical Methodology
Willig et al. (Methods in Ecology and Evolution, 15, 868--885, 2024) cautioned that unequal sampling effort and pseudoreplication can bias the characterisation of species phenology using circular statistics. Borrowing concepts from rarefaction, they proposed bootstrapping to control for time-varying marginal totals that arise from unequal sampling effort over time. This study extends their [...]
Validating causal inference in time series models with conditional-independence tests
Published: 2025-03-17
Subjects: Ecology and Evolutionary Biology, Environmental Sciences, Marine Biology, Natural Resources and Conservation, Population Biology, Sustainability
Ecologists often use time-series models to approximate dynamics arising from density dependence, species interactions, community synchrony, and other processes. Dynamic structural equation models can represent simultaneous and lagged interactions among variables with missing data, and therefore encompasses a wide family of analyses (linear regression, vector autoregressive models, and dynamic [...]
The Individualized Niche: A Case Study in Scientific Conceptual Change
Published: 2025-03-17
Subjects: Arts and Humanities, Other Arts and Humanities, Philosophy
We explore the causes and outcomes of scientific conceptual change using a case study of the development of the individualized niche concept. We outline a framework for characterizing conceptual change that distinguishes between epistemically adaptive and neutral processes and outcomes of conceptual change. We then apply this framework in tracing how the individualized niche concept arose [...]
Urban trace metal contamination is negatively associated with condition and wing morphology in a common waterbird
Published: 2025-03-15
Subjects: Life Sciences
Urban areas suffer from different forms of environmental pollution by light, noise, and chemicals. Pollution by heavy metals has long been associated with industrialization and urbanization processes, increasing the risk of bioaccumulation and compromising the health, condition, and fitness of urban animals. Here, we aimed to investigate the effects of urbanization on bioaccumulation of six heavy [...]
Wing length canalisation and behaviour across birds: a phylogenetic meta-analysis of variance
Published: 2025-03-15
Subjects: Life Sciences
Stronger stabilising selection is expected to lead to a decrease in trait variation (i.e., in higher canalisation). We examined this prediction across species by investigating individual variation in wing length across measured as the coefficient of variation (CV). We hypothesised that species that heavily rely on aerial feeding as well as long-distance migratory species should show higher [...]