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Preprints

Filtering by Subject: Population Biology

Progress toward sustainable management of marine crustacean fisheries

Daisuke Goto, Emily Phillips, Genevieve A.C. Phillips, et al.

Published: 2025-08-11
Subjects: Biodiversity, Ecology and Evolutionary Biology, Environmental Sciences, Marine Biology, Natural Resources and Conservation, Natural Resources Management and Policy, Population Biology

Marine crustacean capture fisheries have been contributing increasingly more to global aquatic food production in recent decades, helping secure socioeconomic benefits. In the past decade the landings of marine crustaceans rose by more than 67% while expanding spatially and taxonomically, doubling their contribution to global fisheries landings. Although efforts to improve the data collection [...]

Trapper Citizen Science: an open-source camera trap platform for citizen science in wildlife research and management

Magali Frauendorf, Jakub W. Bubnicki, Filip Ånöstam, et al.

Published: 2025-08-11
Subjects: Animal Sciences, Biodiversity, Biology, Computational Engineering, Ecology and Evolutionary Biology, Engineering, Life Sciences, Population Biology, Zoology

Effective wildlife monitoring is essential for biodiversity conservation and sustainable management, particularly in the face of rapid environmental changes and human-wildlife interactions. Advances in camera trap technology and citizen science, here used to denote non-professional involvement in scientific research, irrespective of citizenship status, have revolutionized ecological data [...]

National-scale estimates of mammal species abundance in Italy for the Habitat Directive reporting

Luca Santini, Andrea Zampetti

Published: 2025-08-08
Subjects: Ecology and Evolutionary Biology, Population Biology

This report describes the methodological frameworks developed in collaboration with ATIt ETS (https://www.mammiferi.org) to estimate the abundance of mammal populations at the scale of Italy for the species listed under Annexes II, IV, and V of the Habitats Directive. For each species, the estimation methodology was defined based on the availability and quality of data supplied by the individual [...]

Tracking the hidden niches: Movement-based insights into northern lapwing intraspecific variation and conservation

Johanna Esguerra, Annegret Grimm-Seyfarth, Mark Frenzel, et al.

Published: 2025-08-01
Subjects: Animal Sciences, Behavior and Ethology, Biodiversity, Entomology, Life Sciences, Ornithology, Other Animal Sciences, Other Ecology and Evolutionary Biology, Population Biology, Zoology

Context. Global monitoring data reveal farmland bird population declines, primarily driven by agricultural intensification, chemical inputs, and climate shifts. The northern lapwing (Vanellus vanellus), a ground-nesting wader adapted to lowland agricultural matrices, exemplifies this decline across Europe. Objectives. This study quantified intraspecific variation in habitat selection to evaluate [...]

Causal models as a scientific framework for next-generation ecosystem and climate-linked stock assessments

Juliette Champagnat, Cole C. Monnahan, Jane Y Sullivan, et al.

Published: 2025-07-31
Subjects: Biostatistics, Ecology and Evolutionary Biology, Environmental Sciences, Marine Biology, Natural Resources and Conservation, Population Biology, Statistical Methodology, Statistical Models, Terrestrial and Aquatic Ecology

Rapid changes in marine ecosystems highlight the need to account for time-varying productivity in stock assessment models used to support fisheries management. Common approaches incorporate annual variation or regress processes like recruitment, natural mortality, or growth on environmental covariates. While the latter represents a step towards biological realism, it often fails accounting for [...]

Assessing direct effects of insect change on insectivore populations in the United Kingdom

Luke C Evans, Malcolm D Burgess, Simon G. Potts, et al.

Published: 2025-07-25
Subjects: Biodiversity, Ecology and Evolutionary Biology, Population Biology

1. Declines in insect abundance are a cause for concern, with potential downstream impacts on the function of ecosystems. Insects are key food resources for insectivorous vertebrates, with evidence that declines in these species could be driven by changing insect abundance. 2. Quantifying the direct effect of insect abundance on vertebrate population dynamics is challenging especially at large [...]

Latitudinal genetic diversity gradients steepen toward the poles

Anne-Céline Granjon, Michael Gerth, Chloé Schmidt

Published: 2025-07-22
Subjects: Evolution, Genetics, Population Biology

Latitudinal biodiversity gradients are among the best-described biogeographic patterns. However, there is little agreement on whether genetic diversity, the most fundamental level of biodiversity, is also latitudinally distributed. The confusion about the distribution of genetic diversity at biogeographic scales stems in part from the fact that genetic diversity gradients have been described for [...]

Demographic causes of the pesticide crash in the peregrine falcon

Marc Kéry, René-Jean Monneret, Jaume-Adria Badia-Boher, et al.

Published: 2025-06-25
Subjects: Ecology and Evolutionary Biology, Life Sciences, Population Biology

Population crashes in many avian predators during the 1950–70s, caused by organochlorine pesticides, belong to the most spectacular cases in the history of conservation and ecotoxicology. Negative effects of DDT on eggshell thickness, leading to egg breakage and declining productivity, are well-documented. In addition, cyclodiene pesticides such as Dieldrin were strongly suspected to contribute [...]

Free-ranging dogs in the streets: foreseeing a multispecies coexistence crisis beyond shortsighted kindness or conflicts

Nishant Kumar

Published: 2025-06-21
Subjects: Animal Sciences, Behavior and Ethology, Biodiversity, Life Sciences, Population Biology, Zoology

Coexistence solutions tout conflict mitigation goals for commensals and wildlife, often ignoring the lived multispecies entanglements. Tropical cities have become battlegrounds of misguided kindness and escalating conflicts with animals. Human niche expansion creates a paradox for free-ranging denizens: abundant food sources from waste, yet unprecedented ecological pressures from infrastructural [...]

Genomic data confirms that mutation cannot restore genetic diversity lost through population bottlenecks

Toby Gregory Laszlo Kovacs, Simon Ho, Carolyn J. Hogg, et al.

Published: 2025-06-13
Subjects: Ecology and Evolutionary Biology, Genomics, Life Sciences, Molecular Genetics, Population Biology

Maintaining within-species genetic diversity is a critical goal of biodiversity conservation as it determines a species’ ability to adapt to environmental change. Without human intervention, isolated populations can only recover genetic diversity post-bottleneck through the accumulation of new mutations over evolutionary timescales. Using recent estimates of mutation rates from major genomic [...]

Strong impact of the recent Highly Pathogenic Avian Influenza panzootic on population dynamics of a long-lived bird

Jaume-Adria Badia-Boher, Michael Schaub, Martin Mollet, et al.

Published: 2025-05-28
Subjects: Other Immunology and Infectious Disease, Population Biology

Since 2020, the spread of a new Highly Pathogenic Avian Influenza virus (HPAIV-H5N1) has triggered the most severe wildlife panzootic ever recorded, with suspected population crashes in hundreds of species. Yet, no study has evaluated the demographic mechanisms underlying these declines. We used Integrated Population Models and population forecasts to evaluate the demographic impact of HPAIV-H5N1 [...]

Global population delineations and conservation status for marine turtles: tools, methods, and guidance

Bryan P Wallace, Federico Alberto Abreu-Grobois, Peter H Dutton, et al.

Published: 2025-05-15
Subjects: Marine Biology, Other Life Sciences, Population Biology

Negative effects of climate change and fishing activities on Alaskan seabird populations (2002-2011)

Aadi Patangi

Published: 2025-05-12
Subjects: Ecology and Evolutionary Biology, Life Sciences, Population Biology, Terrestrial and Aquatic Ecology

Seabird populations along the Alaskan coast have been rapidly declining due to anthropogenic climate change and other associated factors. This study examines the effects of sea surface temperature (SST) and fishing activity on the abundance of Alaskan seabird species. We downloaded bird observation data from the International Pacific Halibut Commission (IPHC) and then matched the seabird [...]

Decline of the globally rare old-growth specklebelly lichen, Pseudocyphellaria rainierensis, and its implications for temperate rainforest conservation

Stephen T. Sharrett, Francis Waldear, John Villella, et al.

Published: 2025-04-25
Subjects: Biodiversity, Botany, Environmental Indicators and Impact Assessment, Environmental Monitoring, Environmental Sciences, Forest Biology, Forest Management, Natural Resources and Conservation, Population Biology

Epiphytic lichens are key components of temperate rainforests, where they contribute to forest hydrology, nutrient cycles, food webs, and overall biomass and biodiversity. Despite their ecological importance and sensitivity to environmental change few protections exist for lichen conservation and management. Pseudocyphellaria rainierensis, or old-growth specklebelly lichen, is considered an [...]

Spatially varying population indices

Jonas Knape

Published: 2025-04-11
Subjects: Biodiversity, Ecology and Evolutionary Biology, Environmental Indicators and Impact Assessment, Environmental Monitoring, Population Biology

Large scale monitoring is fundamental for reliably tracking the fate of animal populations under changing environments and land-use practices. A common application of large scale population monitoring data is to produce indices of temporal change in species abundances, which are used in environmental policy assessments of species and biodiversity statuses. For index estimation, spatio-temporal [...]

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