iNaturalist is an open science resource for ecological genomics by enabling rapid and tractable records of initial observations of sequenced specimens

This is a Preprint and has not been peer reviewed. The published version of this Preprint is available: https://doi.org/10.1098/rsbl.2023.0251. This is version 3 of this Preprint.

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Authors

Jay Keche Goldberg

Abstract

The rapidly growing body of publicly available sequencing data for rare species and/or wild-caught samples is accelerating the need for detailed records of the samples used to generate datasets. Many already published datasets are unlikely to ever be reused, not due to problems with the data themselves, but due to their questionable or unverifiable origins. In this paper, I present iNaturalist – a pre-existing citizen science platform that allows people to post photo observations of organisms in nature – as a tool that allows genomics researchers to rapidly publish observations of samples used to generate sequencing datasets. This practice aligns with the values of the open science movement; and I also discuss how iNaturalist, along with other online resources, can be used to create an open genomics pipeline that enables future replication studies and ensures the value of genomics datasets to future research.

DOI

https://doi.org/10.32942/X2RP57

Subjects

Life Sciences

Keywords

genomics, iNaturalist, open science

Dates

Published: 2023-05-11 15:18

Last Updated: 2023-09-19 15:17

Older Versions
License

CC-BY Attribution-NonCommercial 4.0 International

Additional Metadata

Language:
English

Data and Code Availability Statement:
not applicable