Preprints
Filtering by Subject: Marine Biology
Seasonal dynamics of epifaunal communities on the Sargassum beds of the coast of Noto Peninsula, Japan
Published: 2025-03-21
Subjects: Marine Biology
Epifaunal communities inhabiting seaweeds are key components of temperate rocky reef ecosystems, playing vital roles in nutrient cycling and biodiversity maintenance. However, limited research has addressed their seasonal dynamics in the semi-enclosed Sea of Japan. This study examined the seasonal changes in epifaunal communities associated with two dominant brown algae, Sargassum macrocarpum and [...]
Validating causal inference in time series models with conditional-independence tests
Published: 2025-03-17
Subjects: Ecology and Evolutionary Biology, Environmental Sciences, Marine Biology, Natural Resources and Conservation, Population Biology, Sustainability
Ecologists often use time-series models to approximate dynamics arising from density dependence, species interactions, community synchrony, and other processes. Dynamic structural equation models can represent simultaneous and lagged interactions among variables with missing data, and therefore encompasses a wide family of analyses (linear regression, vector autoregressive models, and dynamic [...]
Grazer-induced bioluminescence and toxicity in marine dinoflagellates
Published: 2025-03-10
Subjects: Biology, Environmental Microbiology and Microbial Ecology Life Sciences, Marine Biology, Plant Biology
Marine copepods are the most abundant type of multicellular zooplankton in the global oceans. They imprint their surrounding waters with a unique bouquet of polar lipids; copepodamides. Copepodamides are recognized by prey organisms, who respond by inducing defensive traits including bioluminescence, toxin production, colony size plasticity and structural modifications. Copepodamides are [...]
Bottom-up interactions in age-structured stock assessment and state-space mass-balance modelling
Published: 2025-01-20
Subjects: Ecology and Evolutionary Biology, Life Sciences, Marine Biology, Population Biology
Age-structured stock assessment models are used worldwide to predict the likely impact of changing harvest on future fisheries yield. However, age-structured models ignore the impacts of predator consumption on prey survival (top-down impacts) and prey availability on predator growth (bottom-up impacts), whereas multispecies statistical catch-at-age models often incorporate top-down but not [...]
Unbaited underwater video evidences the presence of previ-ously unrecorded fish species, sea krait (Laticauda sp.) and a high frequency of sharks at a remote reef complex (Coral Sea Marine Park, Southwest Pacific)
Published: 2024-12-06
Subjects: Biodiversity, Ecology and Evolutionary Biology, Life Sciences, Marine Biology
The Chesterfield-Bellona atolls and reefs are a vast reef complex located in the Coral Sea Marine Park, estab-lished in 2014 in the New Caledonian Economic Exclusive Zone. In 2013, the New Caledonia government supported the first assessment of fish and benthic habitats conducted in all habitats and over the entire area. The assessment provided a primary knowledge base for establishing the [...]
New technology for an ancient fish: A lamprey life cycle modeling tool with an R Shiny application
Published: 2024-11-25
Subjects: Applied Mathematics, Applied Statistics, Ecology and Evolutionary Biology, Life Sciences, Marine Biology, Natural Resources and Conservation, Natural Resources Management and Policy, Population Biology, Systems Biology, Terrestrial and Aquatic Ecology
Lampreys (Petromyzontiformes) are an ancient group of fishes with complex life histories. We created a life cycle model that includes an R Shiny interactive web application interface to simulate abundance by life stage. This will allow scientists and managers to connect available demographic information in a framework that can be applied to questions regarding lamprey biology and conservation. We [...]
The Influence of Light Colour on the Behaviour of Atlantic Cod in an Experimental Setting
Published: 2024-11-15
Subjects: Behavior and Ethology, Marine Biology
Fishing technologies often exploit the visual sensitivity of target species to alter their behaviours. Atlantic cod (Gadus morhua Linnaeus, 1758) are an economically important species, commonly targeted by fisheries in the North Atlantic, yet the behaviour of adult Atlantic cod in reaction to the simultaneous presentation of various light stimuli has not been assessed in an isolated setting to [...]
The Deadly Trio: Do warming, acidification & deoxygenation destabilize the anemone-algae symbiosis?
Published: 2024-11-04
Subjects: Integrative Biology, Life Sciences, Marine Biology, Physiology, Systems and Integrative Physiology Life Sciences
Anthropogenic climate change is primarily driven by carbon dioxide release, which causes a domino effect of warming, acidification, and hypoxia in aquatic habitats. Using a fully-crossed experimental design, we investigated how exposure to this “deadly trio” of environmental stressors affects the sea anemone, Exaiptasia diaphana and its endosymbiotic dinoflagellates. To mimic conditions found on [...]
BON in a Box: An Open and Collaborative Platform for Biodiversity Monitoring, Indicator Calculation, and Reporting
Published: 2024-10-28
Subjects: Animal Sciences, Biodiversity, Biology, Ecology and Evolutionary Biology, Forest Sciences, Life Sciences, Marine Biology, Plant Sciences
The Convention on Biological Diversity’s Kunming-Montreal Global BiodiversityFramework (GBF) sets ambitious goals to protect and restore biodiversity. It includes a Monitoring Framework that mandates countries to track progress toward these goals using indicators that summarize biodiversity trends. Calculating indicators is challenging for countries due to technical barriers, lack of available [...]
Seasonal Migrants and Traditional Ecological Knowledge in a Region of Risk: The Pulse Seine Fisheries in Limfjorden, Denmark, c. 1740-1860
Published: 2024-07-31
Subjects: Aquaculture and Fisheries Life Sciences, Arts and Humanities, Biodiversity, Economic History, Environmental Studies, Marine Biology, Other Arts and Humanities, Terrestrial and Aquatic Ecology
This article presents the commercial scale and organization of the Danish pulse seine eel fishery in the Limfjord before the advent of modern offshore fisheries. Partly, for environmental concerns, the pulse seine fishery was tightly regulated, with every seine having to be checked and certified by the local district bailiffs. Here, we present the first in-depth analysis of all preserved [...]
Emergent relationships between the functional diversity of marine zooplankton and ecosystem functioning in the global ocean
Published: 2024-07-23
Subjects: Biodiversity, Marine Biology, Terrestrial and Aquatic Ecology
Copepods are a major group of the mesozooplankton and thus a key part of marine ecosystems worldwide. Their fitness and life strategies are determined by their functional traits which allow different species to exploit various ecological niches. The range of functional traits expressed in a community define its functional diversity (FD), which can be used to investigate how communities utilize [...]
Analysis of ecologically relevant sea ice and ocean variables for the Southern Ocean using a high-resolution model to inform ecosystem studies
Published: 2024-06-28
Subjects: Marine Biology, Oceanography and Atmospheric Sciences and Meteorology
Southern Ocean organisms are uniquely adapted to the extreme environmental conditions that characterise this region, making them especially vulnerable to climate change. Alterations to the physical environment have already been linked to alterations in the structure and functioning of entire ecosystems, and ecological disruptions are expected to continue to occur. Although our understanding of [...]
Light Pollution at Sea: Implications and Potential Hazards of Human Activity for Offshore Bird and Bat Movements in the Greater North Sea
Published: 2024-05-24
Subjects: Environmental Health and Protection, Environmental Indicators and Impact Assessment, Environmental Studies, Life Sciences, Marine Biology, Natural Resources and Conservation, Natural Resources Management and Policy, Nature and Society Relations, Ornithology, Other Animal Sciences, Other Ecology and Evolutionary Biology, Social and Behavioral Sciences, Terrestrial and Aquatic Ecology, Water Resource Management, Zoology
Human activity in the North Sea is intensifying, as emerging uses, such as offshore wind farms (OWFs) and liquid natural gas (LNG) terminals, are added to fishing, freight shipping and fossil fuel production as traditional forms of resource exploitation. The volume and scale of these additional installations are projected to increase substantially in the coming decades, which amplifies the need [...]
Ten golden rules for restoration to secure resilient and just seagrass social-ecological systems
Published: 2024-05-20
Subjects: Biodiversity, Ecology and Evolutionary Biology, Marine Biology, Plant Sciences
It is unequivocal that the world has lost a significant proportion of its seagrass, and although glimmers of hope exist, losses continue with many ongoing negative trajectories. First and foremost, we need to put the world on a global pathway to seagrass net gain. Conservation of what remains must be a priority, but we need to increase coverage at rates unlikely to be achieved naturally; [...]
Lumpfish, Cyclopterus lumpus, distribution in the Gulf of Maine, USA: observations from fisheries independent and dependent catch data
Published: 2024-03-29
Subjects: Aquaculture and Fisheries Life Sciences, Marine Biology, Population Biology
The Gulf of Maine (GoM) is one of the fastest-warming parts of the world’s oceans. Some species’ distributional shifts have already been documented, especially for commercially-important species. Less is known about species that are not currently exploited but may become so in the future. As a case study into these issues, we focus on lumpfish (Cyclopterus lumpus) because of the recognized and [...]