Preprints
Filtering by Subject: Terrestrial and Aquatic Ecology
Raczka et al. Interactions between microbial diversity and substrate chemistry determine the fate of carbon in soil.
Published: 2021-01-19
Subjects: Biology, Ecology and Evolutionary Biology, Life Sciences, Terrestrial and Aquatic Ecology
Microbial decomposition drives the transformation of plant-derived substrates into microbial products that form stable soil organic matter (SOM). Recent theories have posited that decomposition depends on an interaction between SOM chemistry with microbial diversity and resulting function. Here, we explicitly test these theories by coupling quantitative stable isotope probing and metabolomics to [...]
Assembly processes lead to divergent soil fungal communities within and among twelve forest ecosystems along a latitudinal gradient
Published: 2021-01-14
Subjects: Biodiversity, Ecology and Evolutionary Biology, Environmental Microbiology and Microbial Ecology Life Sciences, Life Sciences, Microbiology, Terrestrial and Aquatic Ecology
- Latitudinal gradients provide opportunities to better understand soil fungal community assembly and its relationship with vegetation, climate, soil and ecosystem function. Understanding the mechanisms underlying community assembly is essential for predicting compositional responses to changing environments. - We quantified the relative importance of stochastic and deterministic processes in [...]
Population divergence in aggregation and sheltering behaviour in surface and cave-adapted Asellus aquaticus (Crustacea: Isopoda)
Published: 2020-12-19
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Evolution, Life Sciences, Terrestrial and Aquatic Ecology
Aggregation (gathering together) and sheltering (hiding in cover) are basic behaviours that might reduce the risk of predation. However, both behaviours have costs, like increased competition over resources and high prevalence of contact-spread parasites (aggregation) or lost opportunities for foraging and mating (sheltering). Therefore, adaptive variation in these behaviours is expected between [...]
Large contribution of recent photosynthate to soil respiration in Dipterocarpaceae-dominated tropical forest revealed by girdling
Published: 2020-12-14
Subjects: Ecology and Evolutionary Biology, Life Sciences, Terrestrial and Aquatic Ecology
• Tropical forests are the most productive terrestrial ecosystem, fixing around 41 Pg of carbon from the atmosphere each year. A substantial portion of this carbon is allocated belowground to roots and root-associated microorganisms. However, there have been very few empirical studies on the dynamics of this transfer, especially in tropical forests where the response is mediated by high plant [...]
Ecological Countermeasures for Pandemic Prevention: When Ecological Restoration is a Human Health Imperative
Published: 2020-12-05
Subjects: Animal Sciences, Bacteriology, Biodiversity, Biology, Ecology and Evolutionary Biology, Environmental Microbiology and Microbial Ecology Life Sciences, Environmental Public Health, Epidemiology, Immunity, Immunology and Infectious Disease, Immunology of Infectious Disease, Immunopathology, Integrative Biology, International Public Health, Life Sciences, Medicine and Health Sciences, Microbiology, Parasitology, Pathogenic Microbiology, Population Biology, Public Health, Systems Biology, Terrestrial and Aquatic Ecology, Veterinary Infectious Diseases, Veterinary Medicine, Veterinary Microbiology and Immunobiology, Veterinary Pathology and Pathobiology, Zoology
Ecological restoration should be regarded as a public health service. Unfortunately, the lack of quantitative linkages between environmental and human health has limited recognition of these principle. Advent of COVID-19 pandemic provides the impetus for the further discussion. We propose ecological countermeasures as highly targeted, landscape-based interventions to arrest the drivers of land [...]
All together now: Limitations and recommendations for the simultaneous analysis of all eukaryotic soil sequences
Published: 2020-12-01
Subjects: Biodiversity, Ecology and Evolutionary Biology, Life Sciences, Terrestrial and Aquatic Ecology
The soil environment contains a large, but historically underexplored reservoir of biodiversity. While sequencing of prokaryotic marker genes has become commonplace for the discovery and characterization of soil bacteria and archaea, this approach has been increasingly applied to sequencing eukaryotic marker genes to characterize the diversity of soil eukaryotes. However, understanding the [...]
Land use-induced spillover: priority actions for protected and conserved area managers
Published: 2020-11-23
Subjects: Agricultural and Resource Economics, Biodiversity, Communication, Ecology and Evolutionary Biology, Environmental Policy, Environmental Studies, Geography, Health Policy, Immunity, Immunology and Infectious Disease, Immunology of Infectious Disease, International and Area Studies, Life Sciences, Medicine and Health Sciences, Other Ecology and Evolutionary Biology, Other Immunology and Infectious Disease, Other Medicine and Health Sciences, Other Public Affairs, Public Policy and Public Administration, Policy Design, Analysis, and Evaluation, Population Biology, Public Affairs, Public Policy and Public Administration, Public Health, Public Policy, Recreation, Parks and Tourism Administration, Social and Behavioral Sciences, Terrestrial and Aquatic Ecology, Veterinary Medicine
Earth systems are under ever greater pressure from human population expansion and intensifying natural resource use. Consequently, novel micro-organisms that cause disease are emerging, dynamics of pathogens in wildlife are altered by land use change bringing wildlife and people in closer contact. We provide a brief overview of the processes governing ‘land use-induced spillover’, emphasising [...]
When bigger isn’t better – implications of large high-severity wildfire patches for avian diversity and community composition
Published: 2020-11-20
Subjects: Ecology and Evolutionary Biology, Life Sciences, Terrestrial and Aquatic Ecology
Aim: Modern wildfires increasingly create large high-severity patches with interior areas far from less disturbed habitats. We evaluated how these trends impact montane bird communities by investigating the effect of internal distance to lower severity areas, high-severity patch size, and years since fire on avian alpha and beta diversity. Location: Sierra Nevada Mountains, California, [...]
Using citizen science to measure recolonisation of birds after the Australian 2019-20 mega-fires
Published: 2020-11-09
Subjects: Biodiversity, Ecology and Evolutionary Biology, Life Sciences, Terrestrial and Aquatic Ecology
Large and severe fires (“mega-fires”) are increasing in frequency across the globe, often pushing into ecosystems that have previously had very long fire return intervals. The 2019-20 Australian bushfire season was one of the most catastrophic fire events on record. Almost 19 million hectares were burnt across the continent displacing and killing unprecedented numbers of native fauna, including [...]
Heuristics for the sustainable harvest of wildlife in stochastic social-ecological systems
Published: 2020-11-06
Subjects: Ecology and Evolutionary Biology, Life Sciences, Terrestrial and Aquatic Ecology
Sustainable wildlife harvest is challenging due to the complexity of uncertain social-ecological systems, and diverse stakeholder perspectives of sustainability. In these systems, semi-complex stochastic simulation models can provide heuristics that bridge the gap between highly simplified theoretical models and highly context-specific case-studies. Such heuristics allow for more nuanced [...]
Among tree and habitat differences in the timing and abundance of spring caterpillars
Published: 2020-11-04
Subjects: Ecology and Evolutionary Biology, Life Sciences, Terrestrial and Aquatic Ecology
1. Climate warming is causing many spring biological events to advance in timing and where the phenology of resource and consumer advance at different rates this can result in trophic asynchrony. While the temperate study system of deciduous tree – caterpillar – insectivorous passerine has been widely studied, little work has examined whether phenological distribution of caterpillars differ among [...]
Environmental conditions promote local segregation, but functional distinctiveness allow aggregation of catfishes in the Amazonian estuary
Published: 2020-10-22
Subjects: Biodiversity, Ecology and Evolutionary Biology, Life Sciences, Marine Biology, Terrestrial and Aquatic Ecology
Cooccurrence patterns of species can appear through niche-related processes such as (i) environmental filtering matching specific sets of traits to a given environment, and (ii) limiting similarity selecting divergent functional traits to reduce niche overlap. Locally, both processes should act together to shape the distribution of species. We evaluated the importance of environmental variables [...]
Rock glaciers and related cold rocky landforms: overlooked climate refugia for mountain biodiversity
Published: 2020-10-18
Subjects: Biodiversity, Biology, Ecology and Evolutionary Biology, Life Sciences, Terrestrial and Aquatic Ecology
Mountains are global biodiversity hotspots where cold environments and their associated ecological communities are predicted to be threatened by climate warming. Considerable research attention has been devoted to understanding the ecological effects of alpine glacier and snowfield recession. However, much less attention has been given to identifying climate refugia in mountain ecosystems where [...]
Motif: an open-source R tool for pattern-based spatial analysis
Published: 2020-10-17
Subjects: Categorical Data Analysis, Earth Sciences, Ecology and Evolutionary Biology, Environmental Sciences, Life Sciences, Physical Sciences and Mathematics, Statistics and Probability, Terrestrial and Aquatic Ecology
*Context* Pattern-based spatial analysis provides methods to describe and quantitatively compare spatial patterns for categorical raster datasets. It allows for spatial search, change detection, and clustering of areas with similar patterns. *Objectives* We developed an R package **motif** as a set of open-source tools for pattern-based spatial analysis. *Methods* This package provides [...]
Cushion plants act as facilitators for soil microarthropods in high alpine Sweden
Published: 2020-09-24
Subjects: Biodiversity, Ecology and Evolutionary Biology, Entomology, Life Sciences, Population Biology, Terrestrial and Aquatic Ecology
1. Cushion plants can have positive impacts on plant richness in severe environments and possibly across trophic levels on arthropods, an under-studied topic. 2. This study examined whether soil communities under cushions of Silene acaulis and Diapensia lapponica have higher richness and abundance of soil microarthropods (Acari, Collembola) than adjacent non-cushion vegetation; and whether [...]