Preprints
Filtering by Subject: Terrestrial and Aquatic Ecology
Quantifying clearance rates of restored shellfish reefs using modular baskets
Published: 2023-12-08
Subjects: Animal Experimentation and Research, Aquaculture and Fisheries Life Sciences, Biology, Ecology and Evolutionary Biology, Environmental Indicators and Impact Assessment, Environmental Monitoring, Environmental Sciences, Life Sciences, Marine Biology, Oceanography and Atmospheric Sciences and Meteorology, Research Methods in Life Sciences, Terrestrial and Aquatic Ecology, Water Resource Management, Zoology
Shellfish reefs are among the most degraded ecosystems globally, prompting substantial efforts to restore them. While biodiversity gains of restored reefs are well documented, other ecosystem services such as water filtration remain poorly quantified. We present a novel way of measuring water filtration by restored reefs using modular restoration structures called Robust Oyster Baskets (ROB 400). [...]
The world was our oyster: Records reveal the vast historical extent of European oyster reef ecosystems
Published: 2023-12-07
Subjects: Biodiversity, Marine Biology, Terrestrial and Aquatic Ecology
Anthropogenic activities have impacted marine ecosystems at extraordinary scales. Biogenic reef ecosystems built by the European flat oyster (Ostrea edulis) typically declined prior to scientific monitoring. Collating >1,600 records published over 350 years, we created a highly resolved (10km2) map of historical oyster reef presence across its biogeographic range, including documenting abundant [...]
Historical dataset details the distribution, extent and form of lost Ostrea edulis reef ecosystems.
Published: 2023-12-07
Subjects: Aquaculture and Fisheries Life Sciences, Biodiversity, Marine Biology, Terrestrial and Aquatic Ecology
Ocean ecosystems have been subjected to anthropogenic influences for centuries, but the scale of past ecosystem changes is often unknown. For centuries, the European flat oyster (Ostrea edulis), an ecosystem engineer providing biogenic reef habitats, was a culturally and economically significant source of food and trade. These reef habitats are now functionally extinct, and almost no memory of [...]
ATLANTIC SPATIAL: a dataset of landscape, topographic, hydrologic and anthropogenic metrics for the Atlantic Forest
Published: 2023-11-16
Subjects: Spatial Science, Terrestrial and Aquatic Ecology
Space is one of the main drivers of biodiversity, once it regulates the underlying processes affecting the distribution and dynamics of species. It is a fundamental factor in face of the rapid climate and land use and land cover changes at local and global scales, which are linked to habitat loss and fragmentation and their impacts on various organisms. The Atlantic Forest of South America (AF) [...]
An illusion of a macroecological law, abundance-occupancy relationships
Published: 2023-11-01
Subjects: Ecology and Evolutionary Biology, Population Biology, Terrestrial and Aquatic Ecology
In macroecology, a classic empirical observation has been positive relationships between local abundance and species' range, known as the abundance-occupancy relationships (AORs). The existence of this empirical relationship has informed both theory development and applied questions. Notably, the spatial neutral model of biodiversity predicts AORs. Yet, based on the largest known meta-analysis of [...]
Avian zoochory is a probable pathway of European perch colonization in artificial lakes: a reply to Vasemägi et al (2023)
Published: 2023-10-14
Subjects: Life Sciences, Population Biology, Terrestrial and Aquatic Ecology
Amount of carbon fixed, transit time and fate of harvested wood products define the climate change mitigation potential of boreal forest management - A model analysis
Published: 2023-10-14
Subjects: Biogeochemistry, Earth Sciences, Ecology and Evolutionary Biology, Forest Management, Forest Sciences, Life Sciences, Other Forestry and Forest Sciences, Terrestrial and Aquatic Ecology
Boreal forests are often managed to maximize wood production, but other goals, among which climate change mitigation, are increasingly important. Examining synergies and trade-offs between forest production and its potential for carbon sequestration and climate change mitigation in forest stands requires explicitly accounting for how long forest ecosystems and wood products retain carbon from [...]
Functional trait dataset of benthic macroinvertebrates in South Korean streams
Published: 2023-09-22
Subjects: Ecology and Evolutionary Biology, Other Ecology and Evolutionary Biology, Terrestrial and Aquatic Ecology
Functional traits are the result of evolution and adaptation, providing important ecological insights into how organisms interact with their environment. Benthic macroinvertebrates, in particular, have garnered attention as biomonitoring indicators for freshwater ecosystems. This study presents a functional trait dataset for benthic macroinvertebrates, comprising 447 taxa (393 at genus level, 53 [...]
KF-metaweb: A trophic metaweb of freshwater ecosystems of South Korea
Published: 2023-09-20
Subjects: Other Ecology and Evolutionary Biology, Terrestrial and Aquatic Ecology
Motivation: The metaweb is a dictionary of nodes and their potential interactions developed for a particular region, focusing on a particular type of ecosystem. Based on the local biodiversity information at different spatial and temporal scales, the regional metaweb can be easily decomposed into local webs. The generated local webs are useful for understanding spatiotemporal variations in [...]
Candy Darter: Background, Threats, and Conservation for an Endangered Fish
Published: 2023-09-20
Subjects: Environmental Policy, Terrestrial and Aquatic Ecology
Candy darters, once abundant in the West Virginia and Virginia water basins, now require substantial conservation efforts due to habitat destruction and hybridization with the variegate darter species. Direct human effects have also escalated the destruction of candy darter habitats, making the protection of this important species and what remains of their habitat of utmost importance. With the [...]
How does dispersal shape the genetic patterns of animal populations in European cities? A simulation approach
Published: 2023-07-25
Subjects: Biodiversity, Genetics, Other Ecology and Evolutionary Biology, Population Biology, Terrestrial and Aquatic Ecology
Context and objectives Although urbanization is a major driver of biodiversity erosion, it does not affect all species equally. The neutral genetic structure of populations in a given species is affected by both genetic drift and gene flow processes. In cities, the size of animal populations determines drift and can depend on multiple processes whereas gene flow essentially depends on the [...]
Regenerating tropical forests are consistently affected by biological invasions across spatial scales
Published: 2023-07-04
Subjects: Other Ecology and Evolutionary Biology, Terrestrial and Aquatic Ecology
Biological invasions are complex scale-dependent processes. Metacommunity ecology provides the means to understand the effects of invasive non-native species (INNS) because it explicitly considers how local and regional processes interact to drive the three main components of bio-diversity: alpha, beta, and gamma. White-popinac (Leucaena leucocephala (Lam.) de Wit) is a widely distributed INNS in [...]
Extinction drives recent thermophilization but does not trigger homogenization in forest understory
Published: 2023-07-04
Subjects: Botany, Forest Sciences, Life Sciences, Terrestrial and Aquatic Ecology
The ongoing climate change is triggering plant community thermophilization. This selection process is ought to shift community composition toward species adapted to warmer climates but may also lead to biotic homogenization. The link between thermophilization and homogenization, and the community dynamics that drive them (colonization and extinction) remain unknow, but is critical for [...]
Heterogeneous dispersal networks to improve biodiversity science
Published: 2023-06-21
Subjects: Biodiversity, Ecology and Evolutionary Biology, Life Sciences, Population Biology, Terrestrial and Aquatic Ecology
Dispersal plays a key role in shaping spatial patterns of biodiversity, yet its spatial heterogeneity is often overlooked in biodiversity analyses and management strategies. Properly parametrized heterogeneous dispersal networks capture the complex interplay between landscape structure and species-specific dispersal capacities. This heterogeneity, however, is recurrently neglected when studying [...]
Landscape changes in the “valli da pesca” of the Venice lagoon and possible effects on the Ecosystem Services supply
Published: 2023-06-21
Subjects: Environmental Monitoring, Environmental Sciences, Environmental Studies, Natural Resources and Conservation, Nature and Society Relations, Other Environmental Sciences, Remote Sensing, Sustainability, Terrestrial and Aquatic Ecology
Coastal lagoons have long been subject to continuous changes caused by mutual interactions with human activities. Monitoring such changes becomes critical, particularly when modifications in landscape and land cover classes can affect their capacity to ensure Ecosystem Services (ESs). In the Venice lagoon, some confined areas called “valli da pesca” supply provisioning ESs, namely aquaculture and [...]