Preprints
Filtering by Subject: Life Sciences
How to enhance data FAIRness
Published: 2022-03-04
Subjects: Biology, Life Sciences
In recent years, we witnessed an increasing number of funding agencies, scientific journals and scientists agreeing that society and science benefit from open access to research data. Benefits derive mainly from increased access to knowledge for all and improved transparency in academia. However, despite the advances in open science and open data, three significant aspects still need considerable [...]
Long-term trends in seasonality and abundance of three key zooplankters in the upper San Francisco Estuary
Published: 2022-03-02
Subjects: Animal Sciences, Aquaculture and Fisheries Life Sciences, Biodiversity, Ecology and Evolutionary Biology, Life Sciences, Population Biology, Terrestrial and Aquatic Ecology, Zoology
Zooplankton provide critical food for threatened and endangered fish species in the San Francisco Estuary (estuary). Reduced food supply has been implicated in the Pelagic Organism Decline of the early 2000s and further changes in zooplankton abundance, seasonality, and distribution may continue to threaten declining fishes. While we have a wealth of monitoring data, we know little about the [...]
Dirty Transmission Hypothesis: Increased Mutations During Horizontal Transmission Can Select for Increased Levels of Mutualism in Endosymbionts
Published: 2022-02-27
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences
A mutualistic symbiosis occurs when organisms of different species cooperate closely for a net benefit over time. Mutualistic relationships are important for human health, food production, and ecosystem maintenance. However, they can evolve to parasitism or breakdown all together and the conditions that maintain and influence them are not completely understood. Vertical and horizontal [...]
Mountain Gorillas benefit from social distancing too: Close proximity from tourists affects gorillas sociality
Published: 2022-02-25
Subjects: Behavior and Ethology, Biodiversity, Ecology and Evolutionary Biology, Life Sciences
Gorilla tourism supports the protection of the gorilla ecosystem, benefiting humans and wildlife populations living therein. Assessing to what degree the presence and proximity of tourists affect wildlife aids long-term benefits. Because wild animals might see human activities as stressors, we hypothesised that the increased presence and proximity of tourists leads to an immediate increase in [...]
How has bird biodiversity changed over time? A review across spatio-temporal scales
Published: 2022-02-25
Subjects: Biodiversity, Life Sciences
Empirical quantification of biodiversity changes remains a challenge even in well surveyed groups such as birds. This may be because the change depends on spatio-temporal scales, specifically on spatial grain (i.e. area of a sampling unit), geographic extent (i.e. size of the area of interest), temporal grain (i.e. duration of a sampling event), and temporal extent (i.e. length of the time [...]
Survival of the luckiest
Published: 2022-02-25
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences, Psychology, Social and Behavioral Sciences
Opposite dynamics are behind natural selection and sexual selection. While the fittest survives in natural selection, the survivor will most likely be the luckiest when both dynamics are combined.
Achieving global biodiversity goals by 2050 requires urgent and integrated actions
Published: 2022-02-25
Subjects: Agriculture, Animal Sciences, Biodiversity, Ecology and Evolutionary Biology, Forest Sciences, Genetics and Genomics, Life Sciences, Marine Biology, Plant Sciences
Human impacts on the Earth’s biosphere are driving the global biodiversity crisis. Governments are preparing to agree on a set of actions intended to halt the loss of biodiversity and put it on a path to recovery by 2050. We provide evidence that the proposed actions can bend the curve for biodiversity, but only if these actions are implemented urgently and in an integrated manner.
Blood parasite infection causes marginal temporary costs in juvenile birds of prey
Published: 2022-02-24
Subjects: Ecology and Evolutionary Biology, Immunology and Infectious Disease, Life Sciences, Other Ecology and Evolutionary Biology, Parasitology
Physiological costs from parasites arise from host colonization and defence activation and can vary according to the interactions of host and parasite traits and states. Parasite-induced costs crucially differ between stages of infection, but this is difficult to assess in wild vertebrates. To evaluate the effects of blood parasite infection in juvenile birds, we compared physiological measures [...]
Soil biota impacts on plant access to different water pools in soil
Published: 2022-02-22
Subjects: Life Sciences, Other Life Sciences, Plant Sciences
Aims: Soil water availability depends on the capacity of soil pores to hold it via physical forces creating gradient of availability from tightly bound water to highly mobile water. Abiotic factors directly affect the size of these pools and plant access to them. Biotic factors influence plant-soil-water relations and possibly affect soil properties and plant access to different water pools. [...]
Systemic racism alters wildlife genetic diversity
Published: 2022-02-19
Subjects: Ecology and Evolutionary Biology, Life Sciences, Other Ecology and Evolutionary Biology
Humans are the defining feature of urban ecosystems. In the United States, systemic racism has had lasting effects on the structure of cities, specifically due to government-mandated “redlining” policies that produced racially segregated neighborhoods that persist today. However, it is not known whether varying habitat structure and natural resource availability associated with racial segregation [...]
Drivers of community assembly change during succession in wood-decomposing insect communities
Published: 2022-02-19
Subjects: Biodiversity, Biology, Entomology, Life Sciences
1. The patterns of successional change of decomposer communities is unique in that resource availability predictably decreases as decomposition proceeds. Saproxylic (i.e., deadwood-dependent) beetles are a highly diverse and functionally important decomposer group, and their community composition is affected by both deadwood characteristics and other environmental factors. Understanding how [...]
Improving species conservation plans under IUCN’s One Plan Approach using quantitative genetic methods
Published: 2022-02-19
Subjects: Ecology and Evolutionary Biology, Genetics, Genetics and Genomics, Life Sciences
Human activities are resulting in altered environmental conditions that are impacting the demography and evolution of species globally. If we wish to prevent anthropogenic extinction and extirpation, we need to improve our ability to restore wild populations. Ex situ populations can be an important tool for species conservation. However, it is difficult to prevent deviations from an optimal [...]
Graph embedding and transfer learning can help predict potential species interaction networks despite data limitations
Published: 2022-02-19
Subjects: Biodiversity, Life Sciences
Metawebs (networks of potential interactions within a species pool) are a powerful abstraction to understand how large-scale species interaction networks are structured. Because metawebs are typically expressed at large spatial and taxonomic scales, assembling them is a tedious and costly process; predictive methods can help circumvent the limitations in data deficiencies, by providing a first [...]
Past and future uses of text mining in ecology & evolution
Published: 2022-02-16
Subjects: Biodiversity, Bioinformatics, Ecology and Evolutionary Biology, Life Sciences
Ecology and evolutionary biology, like other scientific fields, are experiencing an exponential growth of academic manuscripts. As domain knowledge accumulates, scientists will need new computational approaches for identifying relevant literature to read and include in formal literature reviews and meta-analyses. Importantly, these approaches can also facilitate automated, large-scale data [...]
Density dependence and disease dynamics: moving towards a predictive framework
Published: 2022-02-16
Subjects: Ecology and Evolutionary Biology, Life Sciences, Other Ecology and Evolutionary Biology
High population density is thought to exacerbate parasite exposure rates, leading to increased transmission and greater disease burdens. Different types of interactions exhibit different relationships with density, and therefore so do parasites that are spread by these interactions. Epidemiological models often assume a given density-transmission relationship, and the validity of this assumption [...]