Preprints
Filtering by Subject: Life Sciences
Handling Character Dependency in Phylogenetic Inference: Extensive Performance Testing of Assumptions and Solutions Using Simulated Data
Published: 2022-04-07
Subjects: Animal Sciences, Bioinformatics, Ecology and Evolutionary Biology, Evolution, Life Sciences, Research Methods in Life Sciences
Character dependency is a major conceptual and methodological problem in phylogenetic inference of morphological datasets, as it violates the assumption of characters independency that is common to all phylogenetic methods. It is more frequently observed in higher-level phylogenies or in datasets characterizing major evolutionary transitions, as these represent parts of the tree of life where [...]
Are we underestimating the ecological and evolutionary effects of warming? Interactions with other environmental drivers may increase species vulnerability to high temperatures
Published: 2022-04-06
Subjects: Ecology and Evolutionary Biology, Life Sciences, Other Ecology and Evolutionary Biology, Population Biology, Terrestrial and Aquatic Ecology
Warming, the most prominent aspect of global environmental change, already affects most ecosystems on Earth. In recent years, biologists have increasingly integrated the effects of warming into their models by capturing how temperature shapes their physiology, ecology, behavior, evolutionary adaptation, and probability of extirpation/extinction. The more physiologically-grounded approaches to [...]
The evolution of conspicuousness in frogs: when to signal toxicity?
Published: 2022-04-05
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Evolution, Life Sciences
Many organisms use conspicuous color patterns to advertise their toxicity or unpalatability, a strategy known as aposematism. Despite the recognized benefits of this anti-predator tactic, not all chemically defended species exhibit warning coloration. Here, we use a comparative approach to investigate which factors predict the evolution of conspicuousness in frogs, a group in which conspicuous [...]
Surprising Abundant Mussel Beds in the Center of Boston Harbor in the Midst of a Regional Die-Back
Published: 2022-04-05
Subjects: Ecology and Evolutionary Biology, Life Sciences, Other Ecology and Evolutionary Biology
Mussel beds in the rocky intertidal of New England have long been a paradigmatic example of how physical forces – wave action – reduces predator abundance and enables a distinct ecological community. These beds, however, have witnessed a precipitous >60% decline since the 1970s for currently unknown reasons. Here we report on the surprising persistence of large dense mussel beds in the middle [...]
Reducing the biases in false correlations between discrete characters
Published: 2022-04-01
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences, Other Ecology and Evolutionary Biology
The correlation between two characters is often interpreted as evidence that there exists a significant and biologically important relationship between them. However, Maddison and FitzJohn (2015) recently pointed out that in certain situations find evidence of correlated evolution between two categorical characters is often spurious, particularly, when the dependent relationship stems from a [...]
A human-neutral large carnivore? No patterns in the body mass of gray wolves (Canis lupus) across a gradient of anthropization
Published: 2022-04-01
Subjects: Ecology and Evolutionary Biology, Life Sciences, Other Life Sciences, Terrestrial and Aquatic Ecology
English - The gray wolf (Canis lupus) expanded its distribution in Europe over the last few decades. To better understand the extent to which wolves could re-occupy their historical range, nowadays including anthropized landscapes, it is important to test if and how anthropization can affect fitness-related traits in this species. We modeled how anthropization was associated with the body [...]
Extreme heatwave drives topography-dependent patterns of mortality in a bed-forming intertidal barnacle, with implications for associated community structure
Published: 2022-04-01
Subjects: Animal Sciences, Life Sciences, Marine Biology
Heatwave frequency and intensity will increase as climate change progresses. Intertidal sessile invertebrates, which often form thermally benign microhabitats for associated species, are vulnerable to thermal stress because they have minimal ability to behaviourally thermoregulate. Understanding what factors influence the mortality of biogenic species and how heatwaves might impact their ability [...]
The easyclimate R package: easy access to high-resolution daily climate data for Europe
Published: 2022-03-29
Subjects: Life Sciences, Plant Biology, Plant Sciences
In recent decades there has been an increasing demand by ecologists for harmonized climatic data at large spatial scales and spanning long periods. Here we present easyclimate, a software package to obtain daily climatic data at high resolution (0.0083º, ~1 km) with R. The package facilitates the downloading and processing of precipitation, minimum and maximum temperatures for Europe from 1950 to [...]
Gut microbiota repeatability is contingent on temporal scale and age in wild meerkats
Published: 2022-03-29
Subjects: Life Sciences, Microbiology, Other Microbiology
Inter-individual differences in gut microbiota composition are hypothesized to generate variation in host fitness – a premise for the evolution of host-gut microbe symbioses. However, recent evidence suggests that gut microbial communities are highly dynamic, challenging the notion that individuals harbour unique and stable gut microbial phenotypes. Leveraging a long-term dataset of wild [...]
Hematological and Biochemical Reference Intervals of the Visayan Warty Pig in Negros Occidental, Philippines
Published: 2022-03-24
Subjects: Animal Sciences, Biodiversity, Biology, Forest Biology, Forest Sciences, Laboratory and Basic Science Research Life Sciences, Life Sciences, Other Animal Sciences, Other Life Sciences, Physiology, Zoology
The Visayan warty pig is one of the endemic species of the Philippines that have been listed as "critically endangered." Conservation actions and efforts, such as health assessments, are being carried out to preserve the population. However, there is limited information about the normal hematological and biochemical profile of the species. The study presents reference intervals essential for [...]
Multi-level instrumentation of bivouac thermoregulation: Current methods and future directions
Published: 2022-03-24
Subjects: Entomology, Life Sciences
Army ants are frequently used as charismatic organismal representatives of collective behavior in nature, providing templates for modern engineered systems as well as continuing to drive aspirational goals for the engineered systems of the future. Most attention on army ants has been focused on the ability of groups of ants to self-assemble into adaptive structures such as bridges or even [...]
Plant spectra as integrative measures of plant phenotypes
Published: 2022-03-24
Subjects: Biodiversity, Ecology and Evolutionary Biology, Life Sciences, Plant Biology, Plant Sciences, Terrestrial and Aquatic Ecology
1. Spectroscopy at the leaf or canopy scales is becoming one of the core tools of plant functional ecology. Remotely sensed reflectance spectra can allow ecologists to infer plant traits and strategies—and the community- or ecosystem-level processes they correlate with—continuously over unprecedented spatial scales. 2. Because of the complex entanglement of structural and chemical factors that [...]
Evidence-based Protection of Sea Turtle Eggs and Hatchery Practices
Published: 2022-03-24
Subjects: Biodiversity, Biology, Ecology and Evolutionary Biology, Life Sciences, Marine Biology
It is important for emerging conservationists and wildlife managers to gain experience in the use of evidence-based conservation, by way of critical analysis and understanding of the context and application of conservation actions. We developed a teaching case and activity for undergraduate and graduate courses in conservation biology, wildlife management etc., although it could also be adopted [...]
Synergies and complementarities between ecosystem risk assessment and ecosystem accounting
Published: 2022-03-22
Subjects: Ecology and Evolutionary Biology, Life Sciences
Safeguarding biodiversity and human well-being depends on sustaining ecosystems. Global agreements, such as the Post-2020 Global Biodiversity Framework and UN Sustainable Development Goals, aim to halt and reverse loss and degradation of ecosystems, associated biodiversity and ecosystem services. They require standardised information for quantifying where ecosystem loss and degradation is [...]
Urban food forestry transforms fine-scale soil function for rapid and uniform carbon sequestration
Published: 2022-03-21
Subjects: Biology, Ecology and Evolutionary Biology, Life Sciences, Other Ecology and Evolutionary Biology
Urbanization displaces agriculture and natural ecosystems, constraining food security and carbon (C) sinks. A proposed solution, Urban Food Forestry (UFF), promises local food from trees that can sequester C faster than other land cover types as long as soil function improves. We compared fine-scale variation in soil physical, chemical and biological properties within and between UFF and [...]