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Towards causal predictions of site-level treatment effects for applied ecology

Towards causal predictions of site-level treatment effects for applied ecology

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Authors

Eleanor E. Jackson , Tord Snäll, Emma Gardner, James M. Bullock, Rebecca Spake

Abstract

With limited land and resources available to implement conservation actions, efforts must be effectively targeted to individual places. This demands predictions of how individual sites respond to alternative interventions. Meta-learner algorithms for predicting individual level treatment effects (ITEs) have been pioneered in marketing and medicine, but they have not been tested in ecology. We present a first application of meta-learner algorithms to ecology by comparing the performance of algorithms popular in other disciplines (S-, T-, and X-Learners) across a broad set of sampling and modelling conditions that are common to ecological observational studies. We conducted 4,050 virtual studies that measure the effect of forest management on soil carbon. These varied in sampling approach and meta-learner algorithm. The X-Learner algorithm that adjusts for selection bias yields the most accurate predictions of ITEs. Our findings pave the way for ecologists to leverage machine learning techniques for more effective and targeted management of ecosystems in the future.

DOI

https://doi.org/10.32942/X2KK95

Subjects

Ecology and Evolutionary Biology

Keywords

conditional average treatment effect, treatment effect heterogeneity, uplift modelling

Dates

Published: 2025-06-03 13:39

Last Updated: 2025-06-03 13:39

License

CC BY Attribution 4.0 International

Additional Metadata

Language:
English

Data and Code Availability Statement:
Climate data were sourced from CRU TS (Climatic Research Unit gridded Time Series) (v. 4.07) (Harris et al., 2020). A subset of data simulated by Heureka (Wikström, Edenius, Elfving, Eriksson, Tomas, et al., 2011) (only the NFI plots and environmental variables which were used to generate the results in this paper) with metadata, and all code used to conduct the analysis and produce figures are anno- tated and archived in the Zenodo public repository (Jackson et al., 2024) 10.5281/zenodo.13269917. Code is additionally available in a GitHub repository https://github.com/ee-jackson/tree.