Abiotic environmental factors driving the biomass and community structure of soil bacteria in an arid region

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Authors

Jane Oja, Mohammad Bahram, Tanel Vahter, Siim-Kaarel Sepp, Sakeenah Adenan, Amjad Shraim, Mohammed Alsafran, Leho Tedersoo, Martin Zobel, Talaat Ahmed, Juha M. Alatalo

Abstract

Microbial communities are important determinants of ecosystem functions in deserts. However, bacterial communities and their relationship with edaphic conditions are poorly investigated in these extreme ecosystems. Here we examined the community structure and biomass of bacteria, including/focusing on nitrogen-fixing bacteria, across different soil habitats in Qatar, using high-throughput sequencing and soil fatty acid profiling. To study bacterial community structure correlations and its edaphic drivers, we determined soil physicochemical parameters. Soils in the studied habitats were predominantly colonized by members of Proteobacteria, Actinobacteria, and Chloroflexi, while nitrogen-fixing bacteria were sparse, and the proportion of unidentified fungal taxa was relatively high. According to biomass estimates, there were more bacteria in soils of shrub- and woodlands (known as rawda) in the Qatar Peninsula. This was mediated by the high concentration of gram-positive bacterial fatty acid biomarkers, whereas gram-negative bacterial biomarkers were more abundant in habitats with the highest salinity. Salinity also appeared to alter the community composition of fungi as well as the diversity of bacteria. Overall, soil phosphorus (P) concentration was positively correlated with the increase in diversity and biomass of bacteria and exhibited a pronounced effect on the community composition. These findings suggests P affects bacterial communities in various ways in these hot arid desert soils.

DOI

https://doi.org/10.32942/X2NG6M

Subjects

Life Sciences

Keywords

Soil Bacterial diversity, Phospholipid fatty acid, High-throughput sequencing, Abiotic stress, Arid regions, Soil physicochemical parameters

Dates

Published: 2023-08-07 16:09

License

CC-BY Attribution-NonCommercial 4.0 International

Additional Metadata

Language:
English

Conflict of interest statement:
none

Data and Code Availability Statement:
Raw reads from targeted loci have been deposited in the NCBI SRA (BioProject PRJNA944243)