Connected data landscape of long-term ecological studies: the SPI-Birds data hub

This is a Preprint and has not been peer reviewed. The published version of this Preprint is available: https://doi.org/10.1111/1365-2656.13388. This is version 2 of this Preprint.

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Authors

Antica Culina, Frank Adriaensen, Liam D. Bailey, Malcolm D. Burgess, Anne Charmantier, Ella F. Cole, Tapio Eeva, Erik Matthysen, Chloé Rebecca Nater, Benjamin Conrad Sheldon

Abstract

The integration and synthesis of the data in different areas of science is drastically slowed and hindered by a lack of standards and networking programmes. Long-term studies of individually marked animals are not an exception. These studies are especially important as instrumental for understanding evolutionary and ecological processes in the wild. Further, their number and global distribution provides a unique opportunity to assess the generality of patterns and to address broad-scale global issues (e.g. climate change). To solve data integration issues and enable a new scale of ecological and evolutionary research based on long-terms studies of birds, we have created the SPI-Birds Network and Database (www.spibirds.org) – a large-scale initiative that connects data from, and researchers working on, studies of wild populations of individually recognizable (usually ringed) birds. Within a year of the establishment, SPI-Birds counts 120 members working on more than 80 populations, with data concerning breeding attempts of almost a million individual birds over a 1700 cumulative years, and counting. SPI-Birds acts as a data hub and a catalogue of studied populations. It prevents data loss, secures easy data finding, use and integration, and thus facilitates collaboration and synthesis. We provide community-derived data and meta-data standards and improve data integrity guided by of Findable, Accessible, Interoperable, and Reusable (FAIR), and aligned with the existing metadata languages (e.g. ecological meta-data language). The encouraging community involvement stems from SPI-Birds decentralized approach: research groups retain full control over data use and their way of data management, while SPI-Birds creates tailored pipelines to convert each unique data format into a standard format. We outline the lessons learned, so that other communities (e.g. those working on other taxa) can adapt our successful model. Creating community-specific hubs (such as ours, COMADRE for animal demography, etc.) will aid much-needed large-scale ecological data integration.

DOI

https://doi.org/10.32942/osf.io/6gea7

Subjects

Ecology and Evolutionary Biology, Life Sciences

Keywords

animals, Birds, Database, data hub, data management, data standards, data synthesis, FAIR data, long-term studies, meta-data standards, research network

Dates

Published: 2020-08-12 03:40

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License

CC-By Attribution-ShareAlike 4.0 International