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Modelling irruptive species with hybrid machine learning: A case study of crown-of-thorns starfish outbreaks on the Great Barrier Reef

Modelling irruptive species with hybrid machine learning: A case study of crown-of-thorns starfish outbreaks on the Great Barrier Reef

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Authors

Owen Stewart, Samuel Alexander Matthews , David Warne, Michael Bode

Abstract

Irruptions consist of rapid and severe increases in abundance, which for some species can result in significant economic and environmental damage. Forecasting the timing and location of these irruptions is crucial for effective management, however is difficult due to the complexity of the ecosystems in which they occur and the conditions under which they arise. Hybrid machine learning (ML) modelling has the potential to offer more accurate predictions than standard mechanistic, statistical, and ML approaches by combining the flexibility of ML with existing mechanistic knowledge. In this paper we develop a hybrid forecasting model for crown-of-thorns starfish (COTS) irruptions which contribute substantially to ecosystem degradation on the Great Barrier Reef (GBR). The hybrid components of our model include mechanistic models of COTS larval dispersal between reefs, whose predictive influence emphasises the central role of dispersal on COTS irruptions. Further analyses of variable importance support key hypotheses regarding COTS population dynamics, including the roles of chlorophyll and temperature, and the regional benefits of local management. When compared to existing COTS models, our hybrid approach produces more accurate short term forecasts that would improve managers' ability to target high-risk reefs. Along with producing accurate hindcasts, the model shows promise for predicting irruptions during critical periods at the initiation of GBR-scale irruptive events, which the model suggests are underway in 2026.

DOI

https://doi.org/10.32942/X2J391

Subjects

Physical Sciences and Mathematics

Keywords

hybrid modelling, irruptive species, pest management, crown-of-thorns starfish, decision support

Dates

Published: 2026-09-05 15:42

Last Updated: 2026-09-05 15:42

License

CC BY Attribution 4.0 International

Additional Metadata

Data and Code Availability Statement:
The COTS monitoring data used in this paper is not publicly available, but can be requested from the Great Barrier Reef Marine Park Authority and the Australian Institute of Marine Science. The remaining code and data is available at https://github.com/OwenS1919/cotsOutbreakModellingPaper.git. The majority of modelling and analysis for this paper was conducted in R (version 4.2.3, R Core Team 2023), with some data processing and all plotting completed in Matlab (version R2023b, The MathWorks Inc. 2023).

Language:
English

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