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Is Biology Necessary to Advance Biology?

Is Biology Necessary to Advance Biology?

This is a Preprint and has not been peer reviewed. This is version 4 of this Preprint.

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Authors

John T Van Stan, II , Theodore Bach, Olivier Dangles, Robert Guralnick, Sarah Huebner, Roland Kays, Justin Kitzes, Robert A Krebs, Benjamin Noren, Jarrad H. Van Stan, Michael O Wiitala, Roman Yampolskiy

Abstract

AI is transforming the workflow of biological science. But what role remains for human cognition when the priority is deep theory? We propose a division of labor based on a “coverage asymmetry” between artificial and biological agents. AI excels at extending the encounterable: scaling known mechanisms and exploring complex parameter regimes. However, AI cannot (yet) perform kind formation – the minting of new variables and constraints – because it is bounded by its training ontology. Current systems cannot register that their own vocabulary is incomplete, because recognizing missing variables requires material participation in the system under study. We leverage phenomenological philosophy to argue that new kinds originate in Wild Being: the embodied friction that occurs when an organism encounters something its current categories cannot name (an Out-of-Ontology encounter). We outline a curriculum to train human scientists as “detectors of the unparameterized,” ensuring that the growth of knowledge remains coupled to the growth of care. The question is not whether AI can do biology, but how we design systems to maximize discovery efficiency, producing both knowledge and knowers whose embodied engagement guides what that knowledge is for.

DOI

https://doi.org/10.32942/X2310W

Subjects

Biochemistry, Biophysics, and Structural Biology, Biodiversity, Bioinformatics, Biology, Cell and Developmental Biology, Computational Biology, Philosophy, Scholarship of Teaching and Learning, Systems Biology

Keywords

artificial intelligence, biological discovery, ontology, embodied cognition, out-of-distribution, epistemology

Dates

Published: 2026-07-14 11:32

Last Updated: 2026-07-14 11:32

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License

CC-BY Attribution-NonCommercial 4.0 International

Additional Metadata

Conflict of interest statement:
None

Language:
English

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Downloads: 4