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Persefone.jl: Modelling Biodiversity in Dynamic Agricultural Landscapes

Persefone.jl: Modelling Biodiversity in Dynamic Agricultural Landscapes

This is a Preprint and has not been peer reviewed. This is version 3 of this Preprint.

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Authors

Daniel Vedder , Marco C. Matthies, Gabriel Díaz Iturry, Guy Pe'er

Abstract

Agricultural landscapes are highly dynamic, constantly changing in space and time due to the effects of farm management and environmental factors. To forecast the effects of changes in agricultural systems on biodiversity, we need to understand these landscape dynamics and how they impact different species. Here, we present Persefone.jl, an open-source process-based model of agricultural landscapes and animal species. The model simulates farm management, crop growth, and wildlife animal species using daily time steps in multiple Central European farming regions. We describe the model’s structure and carry out initial simulation experiments, showing that the it replicates multiple qualitative and quantitative empirical patterns. We then discuss the model’s design principles and possible applications in basic and applied research, including as a tool for policy evaluations. Finally, we give an outlook on prospective further developments of the software.

DOI

https://doi.org/10.32942/X20S8K

Subjects

Agriculture, Behavior and Ethology, Biodiversity, Population Biology

Keywords

biodiversity, farm management, agricultural landscapes, policy, individual-based model, agricultural policy

Dates

Published: 2025-08-31 08:13

Last Updated: 2025-09-29 09:02

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License

CC BY Attribution 4.0 International

Additional Metadata

Language:
English

Data and Code Availability Statement:
The Persefone.jl source code and relevant input files are archived on Zenodo (https://doi.org/10.5281/zenodo.16993215). The development version is available at https://git.idiv.de/persefone/persefone-model.