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Preprints

Filtering by Subject: Evolution

Evolution under fluctuating conditions and exposure to heatwaves in the seed beetle, Callosobruchus maculatus

Edward Richard Ivimey-Cook, Sarah Glavan, Sophie Bricout, et al.

Published: 2025-03-24
Subjects: Evolution

Heatwaves, temporary periods of elevated temperatures, are increasing both in magnitude and in frequency and have been shown to have devastating negative effects on a wide range of taxa. However, to date, most studies investigating the impacts of heatwaves have either focus on populations that have evolved under constant conditions prior to assaying or, more importantly, only investigated the [...]

Quantifying macro-evolutionary patterns of trait mean and variance with phylogenetic location-scale models

Shinichi Nakagawa, Ayumi Mizuno, Coralie Williams, et al.

Published: 2025-03-24
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences

Understanding how both the mean (location) and variance (scale) of traits differ among species and lineages is fundamental to unveiling macroevolutionary patterns. Yet, traditional phylogenetic comparative methods primarily focus on modelling mean trait values, often overlooking variability and heteroscedasticity that can provide critical insights into evolutionary dynamics. Here, we introduce [...]

No evidence for assortative mating in the Atlantic puffin

Katja Helgeson Kochvar, Amy C Wilson, Rebecca K Foote, et al.

Published: 2025-03-20
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Evolution, Life Sciences

Assortative mating occurs when individuals with similar phenotypes mate together more often than by chance and can contribute to increases in homozygosity, linkage disequilibrium between loci, and premating isolation in a phenotypically divergent population. While this phenomenon has been well documented in many avian species, evidence is relatively scarce in seabirds. Most seabirds are [...]

Viability selection on coat spot patterns correlates with temperature anomalies in Masai giraffes

Alexia Mouchet, Derek Lee, Monica L Bond, et al.

Published: 2025-03-19
Subjects: Ecology and Evolutionary Biology, Evolution, Life Sciences, Other Ecology and Evolutionary Biology, Population Biology

Remarkable variation in animal colour patterns is often shaped by heterogeneous selection, reflecting adaptation to variable environmental conditions. However, the adaptive functions of patterns and drivers of selection remain poorly understood. Shape and size of colour patterns may help with thermoregulation and thus be altered by temperature anomalies, which are predicted to be more frequent [...]

Measuring natural selection on the transcriptome

John R Stinchcombe, John K. Kelly

Published: 2025-03-11
Subjects: Ecology and Evolutionary Biology, Evolution, Other Genetics and Genomics

The level and pattern of gene expression is increasingly recognized as a principal determinant of plant phenotypes and thus of fitness. The estimation of natural selection on the transcriptome is an emerging research discipline. We here review recent progress and consider the challenges posed by the high dimensionality of the transcriptome for the multiple regression methods routinely used to [...]

Socioecology and the role of scramble competition

Andreas Berghänel, Sarah Marshall, Friederike Range

Published: 2025-03-11
Subjects: Animal Sciences, Animal Studies, Anthropology, Behavior and Ethology, Biological and Physical Anthropology, Biology, Ecology and Evolutionary Biology, Evolution, Life Sciences, Zoology

Ecological explanations for social organization and behavior are central to behavioral ecology. Unfortunately, the continuing mismatch between theoretical predictions and some empirical data led to increasingly complex hypotheses with numerous factors, raising doubts about their predictive value or even falsifiability. Moreover, several taxon-specific socioecological hypotheses have been [...]

Tracheal chambers as a key innovation for high frequency emission in bat echolocation.

Nicolas Louis Michel Brualla, Laura AB Wilson, Khizar Hayat, et al.

Published: 2025-03-05
Subjects: Animal Sciences, Biology, Ecology and Evolutionary Biology, Evolution, Life Sciences, Zoology

Key innovations play a crucial role in driving biodiversity and facilitating evolutionary success by enabling organisms to adapt to various ecological niches through the diversification of phenotypic traits. These innovations have been observed in different vertebrate clades, such as mammals evolving hypsodonty to graze on contemporary grasses and bats with the evolution of echolocation, [...]

Exploring the interplay of epigenetics and individualization

Denis Meuthen, Joseph I. Hoffman, Joachim Kurtz, et al.

Published: 2025-03-04
Subjects: Ecology and Evolutionary Biology, Evolution

Considering individual differences enhances our understanding of eco-evolutionary processes. Epigenetic modifications, which enable the same genotype to produce different phenotypes, may serve as a key proximate mechanism underlying these differences. We propose that epigenetic mechanisms mediate the realization of individualized niches. This process is best understood by distinguishing between [...]

Explanations of the obstetric dilemma: evolutionary conflict exacerbates health problems in pregnancy and childbirth

Dakota E McCoy, Jennifer Kotler, Brianna Weir, et al.

Published: 2025-03-03
Subjects: Anthropology, Biological and Physical Anthropology, Ecology and Evolutionary Biology, Evolution, Genetics, Life Sciences, Maternal and Child Health, Medicine and Health Sciences, Translational Medical Research

In their recent Nature Ecology and Evolution paper, Webb and colleagues show that chimpanzee pelvises present a tight fit for newborn infants, just like in humans. Their detailed 3D characterization shows that the degree of the squeeze is comparable between humans and chimpanzees, and that both have sexually dimorphic pelvises. The authors challenge the so-called “obstetric dilemma” – the [...]

Repeated mitochondrial capture with limited genomic introgression in a lizard group

Wesley Read, Rebecca J Laver, Ching Ching Lau, et al.

Published: 2025-02-19
Subjects: Ecology and Evolutionary Biology, Evolution, Genetics and Genomics, Life Sciences

Mitochondrial introgression is common among animals and is often first identified through mitonuclear discordance — discrepancies between evolutionary relationships inferred from mitochondrial DNA (mtDNA) and nuclear DNA (nuDNA). Over recent decades, genomic data have also revealed extensive nuclear introgression in many animal groups, with implications for genetic and phenotypic diversity. [...]

On the feasibility of nonadaptive, nonsequential abiogenesis

Juan Rivas-Santisteban

Published: 2025-02-18
Subjects: Biochemistry, Biochemistry, Biophysics, and Structural Biology, Cellular and Molecular Physiology, Comparative and Evolutionary Physiology, Computational Biology, Evolution, Molecular Biology, Molecular Genetics, Other Ecology and Evolutionary Biology, Population Biology, Systems and Integrative Physiology Life Sciences, Systems Biology

The emergence of life from non-living matter remains one of the most profound unresolved questions in natural philosophy. Classical models derived from the Oparin-Haldane hypothesis assume a gradual (sequential), selective assembly of biological precursors. Yet, for more than a century, all experimental efforts in this direction have failed in their attempt to achieve material abiogenesis. May be [...]

A new perspective on Squamate social cognition – the use of semiochemicals

Birgit Szabo

Published: 2025-02-07
Subjects: Behavior and Ethology, Ecology and Evolutionary Biology, Evolution, Life Sciences

The Social Intelligence Hypothesis suggests that cognition might be key to enable animals to live in social groups. Especially social cognition is important as it allows animals to respond appropriately to conspecifics and ensure group cohesion. Social cognition is extensively studied in mammals and birds but to gain a broad understanding of the benefits of social cognitive processes in social [...]

Transmission of human handedness: a reanalysis

Rony Karstadt, Chloe Shiff, Tomer Oron, et al.

Published: 2025-02-03
Subjects: Evolution

Human handedness results from the interplay of genetic and cultural influences. A gene-culture co-evolutionary model for handedness was introduced by Laland et al. (1995), and the present study generalizes that model and the related analysis. We address ambiguities in the original methodology, particularly regarding maximum likelihood estimation, and incorporate sex differences in cultural [...]

Promoting the use of phylogenetic multinomial generalised mixed-effects model to understand the evolution of discrete traits

Ayumi Mizuno, Szymon Marian Drobniak, Coralie Williams, et al.

Published: 2025-01-30
Subjects: Ecology and Evolutionary Biology, Evolution

Phylogenetic comparative methods (PCMs) are fundamental tools for understanding trait evolution across species. While linear models are widely used for continuous traits in ecology and evolution, their application to discrete traits - particularly ordinal and nominal traits - remains limited. Researchers sometimes recategorise such traits into binary traits (0 or 1 data) to make them more [...]

The rise and fall of proboscidean ecological diversity

Juan L. Cantalapiedra, Oscar Sanisidro, Steven Zhang, et al.

Published: 2025-01-21
Subjects: Evolution

Proboscideans were keystone Cenozoic megaherbivores and present a highly relevant case study to frame the timing and magnitude of recent megafauna extinctions against long-term macroevolutionary patterns. By surveying the entire proboscidean fossil history using model-based approaches, we show that the dramatic Miocene explosion of proboscidean functional diversity was triggered by their [...]

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